Tachysurus fulvidraco (yellow catfish): 113644191
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Entry
113644191 CDS
T08119
Symbol
vim
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113644191 (vim)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113644191 (vim)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfd04812
]
113644191 (vim)
04147 Exosome [BR:
tfd04147
]
113644191 (vim)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
113644191 (vim)
Cytoskeleton proteins [BR:
tfd04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
113644191 (vim)
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113644191 (vim)
Exosomal proteins of other cancer cells
113644191 (vim)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
DUF7491
FKBP15
TPR_MLP1_2
TolA_bind_tri
GAS
BLOC1_2
Fib_alpha
PfkB
DUF4407
Motif
Other DBs
NCBI-GeneID:
113644191
NCBI-ProteinID:
XP_027004624
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All DBs
Position
3:complement(17215041..17220353)
Genome browser
AA seq
454 aa
AA seq
DB search
MANRSTATSRQSSSYTRIFGGERSVSARSCYSSRQHSAPARTARLSYSTVSAPPSRSARV
TSANLPRLASETLDFALSSAINVDFKAHRTNEKAEMQQLNDRFACYIEKVRFLERQNKML
NTELAQFRGKGTSRVGDLYEEEMRELRRQVDELNSDKARVEVDRDNLMEDIERLREKLQE
EVLQREDAENNLQVFRQDVDNATLARLDLEHKVDSLQEEITFLKKLHDEELVELQAQIQD
QHVQIDMDIAKPDLTAALRDVRLQYETLASKNIHEAEEWYKSKFADLSEAAARNTEAIRQ
AKQDANEYRRQVQTLTCEVDALKGTNESLERQMGELEDNFAMESSSYQETIARMDEEIQN
MKDEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRIANPLPNFSSFNLRESMIETK
PLIENLSKKVVIKTIETRDSQVIHESTQHHEDLE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcgatccacagcaacttctcgccagtcctcttcttacacaaggatatttggt
ggtgagcgcagcgtctccgctcgctcctgttactccagccgtcagcactcagctccagcg
cgcacagcgcgtctctcctacagcaccgtctccgctccgccgagcagaagtgcgcgagtg
acaagcgcaaacttgccccgactcgcatccgagacgttggacttcgccctgtccagtgcc
atcaacgtcgatttcaaagcgcaccggacaaacgagaaagccgagatgcagcagctaaat
gaccgctttgcgtgctacatagagaaggtgcgctttctagagcggcagaacaagatgctg
aacaccgagctggcgcagttcagaggaaaaggaacatcccgagtcggagatctttatgag
gaggagatgagagagttacgaaggcaagtggacgagctcaacagtgataaggccagggtg
gaagtggaccgagataatttaatggaggatatcgaacgcctgagagaaaagcttcaagaa
gaggtccttcaaagggaagatgctgaaaacaacctccaggttttcaggcaggatgttgat
aatgcaaccctggctcgtctagacttggagcacaaggtggactccctacaggaggagatt
actttcctgaagaaacttcatgatgaggagcttgttgagctgcaggcccagatacaagac
cagcatgtgcagattgatatggacatagcaaagcctgatctgaccgctgcactgcgagat
gttcgccttcagtatgagactctggccagcaagaacatccatgaggctgaggaatggtac
aaatctaagtttgccgatctgtcagaggctgctgctcgaaacactgaagcaatccgccag
gccaaacaggatgctaatgaatatcgccgccaggtgcagactttaacctgtgaggtggat
gcacttaagggcactaacgagtctctggaacgccaaatgggggaactagaggacaatttt
gccatggagtcctctagttaccaggaaaccatcgctcgtatggatgaagaaatccaaaac
atgaaggatgagatggctcgtcacttgcgtgagtaccaagaactgctgaatgtcaaaatg
gccctggacattgagattgcgacctacaggaagctgctggagggagaggagagcaggatt
gccaatccactgcccaatttttcctcttttaatttgagagaatccatgatagaaaccaaa
ccacttattgagaacctgtccaagaaagtggtgattaaaactatagaaacaagagatagt
caagtgatccatgagtctactcagcatcatgaagacctggagtga
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