KEGG   Tachysurus fulvidraco (yellow catfish): 113644191
Entry
113644191         CDS       T08119                                 
Symbol
vim
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113644191 (vim)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tfd03019]
    113644191 (vim)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tfd04812]
    113644191 (vim)
   04147 Exosome [BR:tfd04147]
    113644191 (vim)
Messenger RNA biogenesis [BR:tfd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     113644191 (vim)
Cytoskeleton proteins [BR:tfd04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     113644191 (vim)
Exosome [BR:tfd04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113644191 (vim)
  Exosomal proteins of other cancer cells
   113644191 (vim)
SSDB
Motif
Pfam: Filament Filament_head DUF1664 DUF7491 FKBP15 TPR_MLP1_2 TolA_bind_tri GAS BLOC1_2 Fib_alpha PfkB DUF4407
Other DBs
NCBI-GeneID: 113644191
NCBI-ProteinID: XP_027004624
LinkDB
Position
3:complement(17215041..17220353)
AA seq 454 aa
MANRSTATSRQSSSYTRIFGGERSVSARSCYSSRQHSAPARTARLSYSTVSAPPSRSARV
TSANLPRLASETLDFALSSAINVDFKAHRTNEKAEMQQLNDRFACYIEKVRFLERQNKML
NTELAQFRGKGTSRVGDLYEEEMRELRRQVDELNSDKARVEVDRDNLMEDIERLREKLQE
EVLQREDAENNLQVFRQDVDNATLARLDLEHKVDSLQEEITFLKKLHDEELVELQAQIQD
QHVQIDMDIAKPDLTAALRDVRLQYETLASKNIHEAEEWYKSKFADLSEAAARNTEAIRQ
AKQDANEYRRQVQTLTCEVDALKGTNESLERQMGELEDNFAMESSSYQETIARMDEEIQN
MKDEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRIANPLPNFSSFNLRESMIETK
PLIENLSKKVVIKTIETRDSQVIHESTQHHEDLE
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggcaaatcgatccacagcaacttctcgccagtcctcttcttacacaaggatatttggt
ggtgagcgcagcgtctccgctcgctcctgttactccagccgtcagcactcagctccagcg
cgcacagcgcgtctctcctacagcaccgtctccgctccgccgagcagaagtgcgcgagtg
acaagcgcaaacttgccccgactcgcatccgagacgttggacttcgccctgtccagtgcc
atcaacgtcgatttcaaagcgcaccggacaaacgagaaagccgagatgcagcagctaaat
gaccgctttgcgtgctacatagagaaggtgcgctttctagagcggcagaacaagatgctg
aacaccgagctggcgcagttcagaggaaaaggaacatcccgagtcggagatctttatgag
gaggagatgagagagttacgaaggcaagtggacgagctcaacagtgataaggccagggtg
gaagtggaccgagataatttaatggaggatatcgaacgcctgagagaaaagcttcaagaa
gaggtccttcaaagggaagatgctgaaaacaacctccaggttttcaggcaggatgttgat
aatgcaaccctggctcgtctagacttggagcacaaggtggactccctacaggaggagatt
actttcctgaagaaacttcatgatgaggagcttgttgagctgcaggcccagatacaagac
cagcatgtgcagattgatatggacatagcaaagcctgatctgaccgctgcactgcgagat
gttcgccttcagtatgagactctggccagcaagaacatccatgaggctgaggaatggtac
aaatctaagtttgccgatctgtcagaggctgctgctcgaaacactgaagcaatccgccag
gccaaacaggatgctaatgaatatcgccgccaggtgcagactttaacctgtgaggtggat
gcacttaagggcactaacgagtctctggaacgccaaatgggggaactagaggacaatttt
gccatggagtcctctagttaccaggaaaccatcgctcgtatggatgaagaaatccaaaac
atgaaggatgagatggctcgtcacttgcgtgagtaccaagaactgctgaatgtcaaaatg
gccctggacattgagattgcgacctacaggaagctgctggagggagaggagagcaggatt
gccaatccactgcccaatttttcctcttttaatttgagagaatccatgatagaaaccaaa
ccacttattgagaacctgtccaagaaagtggtgattaaaactatagaaacaagagatagt
caagtgatccatgagtctactcagcatcatgaagacctggagtga

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