Tachysurus fulvidraco (yellow catfish): 113646372
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Entry
113646372 CDS
T08119
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-3
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113646372
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113646372
Ion channels [BR:
tfd04040
]
Ligand-gated channels
GABA-A
113646372
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
113646372
NCBI-ProteinID:
XP_047664340
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Position
25:17042360..17061933
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AA seq
471 aa
AA seq
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MKLILLSLRLLCLACLCPVTLLNHRHPNRRKNKDVYLGEHNKHKHAGRIDYKLKKQDSTK
SLLIKTEQLLRIEEHDFAMRPGFGGSAIPVGIDVQVESLDSISEVNMDFTMTLYLRHYWK
DERLAFPSGNNLSRTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNVLYS
VRITVTAQCSMDFSSFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRTDEIVLSQFFI
EEFNPSSGLAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVVLSWVSFWIDRRAV
PARVSLGITTVLTMSTIITGVSASMPQVSYVKAVDIYLWSSFLFVFLSVIEYAAVNYFTT
VEEMKKMKKGKLPSFDTSQAMAFDGCFHDPDMELSTFPQLTDLGVEPPMSSQNSSVPEVP
PALGTRLRKTRPLRYHLQLLMSNSYIIDSYSRILFPLAYLTFNIIYWSVYT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgattctgctgagcctcaggctgctgtgtctggcctgcttgtgtcctgtcaca
ctgctcaatcaccgccacccaaaccgcaggaagaacaaggacgtgtacctgggagaacat
aacaagcacaaacatgccggccggattgactacaagctgaaaaagcaggacagcaccaag
tctctcctgatcaaaaccgagcagctgctgaggatcgaggaacacgacttcgccatgaga
ccaggatttggaggctcagccattcccgtaggcatcgacgtacaggtggagagtttagac
agcatctcagaggtcaacatggacttcaccatgacgctctacctgaggcattactggaaa
gacgagcgtctggcttttccctcgggcaacaacctgagccggacgttcgacgcccggctg
gtgaagaagatctgggttcctgacgtcttcttcgtccactcaaagcgctccttcattcac
gacaccaccatggagaacatcatgctgagggtttacccagacggaaacgtgctttatagc
gtcaggataacggtaacggctcagtgctccatggacttcagcagctttcctctggacact
cagaactgttccctggagctggagagctacgcttataatgaaaacgacctcatgctgtac
tggaagaacggaaacgactctctcagaacagatgagatcgttctctcgcagttctttata
gaggagttcaacccgtccagcggcctggccttctacagcagcaccggctggtacaacaga
ctctacatcaacttcatcctcaggagacacattttcttcttcatgctgcagacctacttt
cccactatgttaatggtggtgctctcctgggtgtccttttggatcgacagaagagccgta
cctgctcgtgtctcactcggaatcaccaccgtcttgaccatgtccaccatcatcaccggc
gtgtcagcctccatgccccaggtgtcctatgtaaaggcggtggatatctacctgtggtcc
agtttcctgtttgtcttcctgtcagtcatcgaatacgctgctgtcaactacttcaccacc
gtggaggagatgaagaagatgaagaaggggaagctccccagtttcgacacgtcccaggcc
atggccttcgatggctgtttccacgacccggacatggagctcagcacctttcctcagctg
acggatctcggtgtggaacctcccatgtcttctcagaactccagcgttcctgaggttcct
cctgctctgggaacacgtctacggaaaacacgaccgctgagataccacctccagctgctc
atgagcaacagctacataattgactcgtactccaggatcctgtttcctctcgcctacctc
acctttaacatcatctactggagcgtctacacctga
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