Tachysurus fulvidraco (yellow catfish): 113646524
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Entry
113646524 CDS
T08119
Symbol
taf1c
Name
(RefSeq) TATA box-binding protein-associated factor, RNA polymerase I, subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113646524 (taf1c)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
113646524 (taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
BSMAP
Motif
Other DBs
NCBI-GeneID:
113646524
NCBI-ProteinID:
XP_027008637
LinkDB
All DBs
Position
21:14665278..14685284
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AA seq
977 aa
AA seq
DB search
MDYKFPNQLFPYYYLNGPPSLDSKHDYGGWGAYGQVLETSREPFQSDVEGETPFLFQPQC
KVDGEVWVPTEPIVTPLLPPYQDTKLLMARPVSPDDFPEHLKYFHVYHYMDSFSVMGQLL
GEHFTFASRHCKDVASLGKMKYFLRNLNYKDCEVQCLKNVSRYHHLLGDITPDIPSSLLA
ELLHEELIHQQELEHFQPATTGGALAIVSNITCQNEAFLIYPSGDALDSINFHPMELDFR
KDKPAGVTMADKPLVVNLDGTVRQVSVAQVNDEAYLGLRSDHCCAAWEMKASNHPRSLEV
VQLKQRATSLNVSPHVSGEFVVASESGAAYLWIVGKGLQKIRDEKMNLYFNAKSPWRWCE
FTAHPRVMVYADGTGAELTDIRSSDCRTLFRISGAAACKSGERVVLGKYLAESHGFHHLI
TTQFSAYLLDERMPCVPALKWEHMLETPPCFAHVVPALGQSSSSKILLGAQRAQETRMLQ
YSGGRERACQAEGPIQKLYSPCESLKIQQLPHRRQKAQERLAARAAGLTATQNNGFLCVF
QLTEAGDIFYQLLRHSDPTNSEPHQSHSGEDSNLEKEQNQRMQSQVELLVNDIHEENDSD
TSDDDQMKISKEAGINSKAAHVLESSMHFAKSKSGHPLRPTIPKMASRNLKLIWKKWLES
LLTKSKGSKRSLRHRKIKTSAVLQCEVKQSDKLEEDKFKRLRKDQAEILKTKKLLVHGET
YLPPLEVIPVPDEVDPKDWTDDLSQRISASWMDGWNNWWEEKLGLNRDAKIEALRRKRRQ
AKRAKARNRVSLASSFTSSISYQDDLSEWSSATSQYLSSDTESVHTFQSAPELDDISEHE
VSSKNTVGLKSPQKTKKSSEKDKAFGTARSPPRDVQKLPSQAPTMESNSALFSSSLSSLK
ESHHGHQKIRRWQQHQDYRNSLFGSSQELKQNDEGSTSAGSISTKPRPSSLLLSSQASLR
TSSQASQTRKKKSRMGF
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggattataaattccctaatcagcttttcccatattattatctgaacggacctccgagt
ttagactcgaagcatgattacggaggctggggcgcttatggacaggtgctggagaccagc
agagaaccttttcagagtgatgtagagggagagactccattcctgtttcagccccagtgt
aaggtggatggagaggtgtgggtccctactgagccgattgtaacaccacttctccctccc
taccaagataccaagctgttaatggctcggcctgtcagtccagacgacttccctgaacat
ttgaagtatttccatgtgtatcactacatggattcattctcagtgatgggacagctgctt
ggagaacacttcacttttgccagtaggcattgtaaggatgttgccagtttgggtaagatg
aagtactttctacgcaacctgaattataaagattgcgaggtgcagtgtttaaaaaatgtg
agccgctatcaccaccttctgggtgacattacccctgacattccctcctctctcctggct
gagcttctgcacgaggagttgatccatcaacaggaattggaacacttccaacctgccaca
actggcggtgctctcgccatcgtctcaaacatcacatgtcagaatgaagcctttctgatt
tatcccagtggagatgctctagactccatcaattttcaccctatggagctggatttcagg
aaagataaacctgcgggtgtcaccatggccgacaagcctctggtggttaatctggatgga
acagttaggcaggtcagcgtggcccaggtgaatgatgaagcttatctaggcttgcgttca
gatcattgctgtgcagcatgggaaatgaaagcctctaatcatcctcgttctttagaggtg
gtgcagctgaagcaacgagccaccagtctcaacgtcagtcctcatgtttctggagagttt
gtcgtagccagcgagagtggagcagcctatctctggattgtgggaaagggcctgcaaaag
attcgggatgaaaagatgaacctgtacttcaatgccaagtcaccatggcgatggtgtgag
ttcacggctcatccacgcgtgatggtttatgctgatgggactggagctgagcttacagac
ataaggagcagtgattgtcgcacgttgttccggatcagtggggcagctgcttgtaagagt
ggagaaagagtggtcttgggcaaatacctggcagaaagccacggattccaccacctcatt
actacacagttctccgcatacctcctggatgagcgaatgccttgtgtgcctgccctgaag
tgggagcacatgctggagacacctccctgttttgcccatgttgtgccagctttgggccaa
agcagcagctctaaaatccttctgggagcccagagagcacaggagactaggatgctgcag
tattctggtggaagagaacgggcatgccaagcagaaggtccaattcaaaaactgtacagt
ccgtgtgagagcctgaagattcagcagctaccacacagacggcagaaagcacaagaaagg
ttggccgcacgtgccgcaggcctaactgcaacacagaacaatggctttctgtgtgtgttc
cagctcacagaggccggggatattttctaccagctgctaagacattctgatccaaccaac
tcagagccacatcagtcacactcgggtgaagacagcaaccttgaaaaagagcaaaatcag
cgtatgcagagccaagtagaactgctcgtcaatgacattcatgaggagaatgactctgat
acttcagatgatgatcagatgaagatctctaaagaagcagggattaactccaaagctgct
catgttctggaatcatccatgcattttgctaagagtaaaagtggtcatcccctgaggcca
acgattcccaaaatggctagccgcaatttaaaattaatctggaaaaaatggctggaatcc
ctcttgacaaaatctaaaggaagcaaacgtagcttgaggcacaggaaaataaagaccagt
gctgtattacagtgtgaagtcaaacaaagtgacaagcttgaggaggacaagtttaagaga
ttgaggaaagaccaggcagagatcttaaagaccaagaagctgcttgttcatggggaaaca
tacctgcctcctctagaggtgattccagttccagatgaggtggaccccaaggactggaca
gatgatttgagtcagcgcataagtgcctcgtggatggatggttggaataactggtgggaa
gaaaagctgggtctaaaccgggacgccaagattgaagccctgagaaggaaacgccgccag
gcaaagagagccaaagccagaaacagagtctcacttgcttcaagcttcacttcttccatc
agctaccaggacgatctgtctgaatggtcatcagccaccagtcagtatctgagttcagac
acagagagcgtccatacctttcagagtgcaccagagcttgacgatatttctgagcacgag
gtatcatctaaaaacacagtagggttgaaaagccctcaaaaaacaaaaaaaagctctgag
aaggataaagcctttggtacagcccgatctcctccaagggacgtccaaaaactgccaagc
caggctcctactatggaaagcaactctgcacttttttcttcctcattgtccagtttgaaa
gagtcgcatcatggccatcaaaaaataagacggtggcagcagcatcaggactaccgcaat
tctctctttggctcttctcaagaacttaaacagaatgacgagggcagtacatcagctggt
tcaatttctaccaaaccaagaccttccagtttacttttatcgtcacaggcttcattgagg
acttcttcacaggcttcccagactcggaaaaagaagtctcgaatgggattctga
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