Tachysurus fulvidraco (yellow catfish): 113648233
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Entry
113648233 CDS
T08119
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfd03016
]
113648233 (cdkal1)
Enzymes [BR:
tfd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
113648233 (cdkal1)
Transfer RNA biogenesis [BR:
tfd03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
113648233 (cdkal1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
113648233
NCBI-ProteinID:
XP_047666952
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All DBs
Position
3:28944773..29130683
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AA seq
561 aa
AA seq
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MPSACDSLVDDIEDMVSSSEPASLQRSSSRQSVIPRVRKRKDLTANEELQADSVIPGTQK
VWMRTWGCSHNSSDGEYMAGQLAASGYKMTDDPAEADVWLLNSCTVKNPAEDHFRNNIKK
AQEQNKKVVLAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGPKKDN
GKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWELVKEIPEGCMLRLGMTNPPYILEHLEEM
AKILCHPRVYAFLHVPVQSASDSVLMDMKREYCCDDFTHVVDFLKDRVPGITIATDIICG
FPGETDEDFQQTMELVRKYRFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKELSALFH
SYNPYDHEVGQRQSVLVTEESFDTQYYVAHNRFYEQVLVPKKLEFKGKMIKVDIFEAGKH
FLRGRPVEESTVITPSISRPLEKGEISGLGQCLKAASRNSIPASMTPSAALTGCWRNLDG
QGVTLLSVGLALLAALVLFYL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctgcgtgcgactctcttgttgatgatatcgaggacatggtgtcctccagcgag
ccggcttctcttcagcgctcctcaagcagacagtctgtcattccccgagtaagaaaacgg
aaagatctcacagctaacgaggaattgcaggctgacagtgtgatcccgggcacccagaaa
gtgtggatgaggacgtggggctgctcacataacagctcagatggggagtacatggcgggg
caactggctgcaagcggctacaagatgactgacgacccggccgaagcagatgtttggctg
ctgaacagctgcacggtcaaaaacccagcagaagatcacttcaggaacaacatcaagaaa
gctcaggagcagaataagaaggtggtgctagcaggatgtgttcctcaggctcagcccagg
atggattacctcaagggcctgagcatcatcggggtccagcagattgatcgtgtggtggag
gtggtggacgaagcggtgaaaggtcactctgtacgtctgctgggtccaaagaaagataat
ggcaagcggcttggtggcgctcgattggatttgccgaagattaggaagaacccgctgatt
gaaatcatttccatcaatacaggatgtctgaacgcttgcacctactgcaaaaccaagcat
gctcgcggcgacctggccagttaccccatcgaggaactggtggaacgagccaggcagtcc
ttccaggagggagtgtgtgagatctggctgacgagcgaggacacgggagcttacgggagg
gacatcggcacggatctgcccaccctgctgtgggagctggtgaaggagatccctgagggc
tgcatgctccgcctgggcatgaccaacccaccctatatcctcgagcacctggaggaaatg
gctaagattctgtgccacccgcgagtgtacgccttcctgcacgtcccggtccagtcagcg
tcggacagcgtgttgatggacatgaagagagagtactgctgtgacgacttcacacacgtc
gtcgacttcctgaaggacagggttcctggcatcaccatcgccactgacattatctgtggc
tttccgggcgaaacggacgaggactttcagcagacgatggagcttgtgagaaagtaccga
ttcccaagcctcttcatcaaccagttctacccacgtcccggaactccggcggccaagatg
gagcaggtcccggcacatgtgaaaaaacaaagaaccaaggagctgtcggcgttgttccac
tcatacaacccttacgaccatgaggtgggacagaggcagagtgtgttagtcaccgaggaa
tccttcgacactcagtactacgtcgcacacaacagattctacgaacaggttctggttccc
aaaaagctggagtttaaagggaagatgattaaagttgacatctttgaggcagggaaacac
ttcctacgaggtcgtccagtggaggagtccacggtcatcacgccatccatcagccggccg
ctggagaaaggagagatatccggcctcggtcagtgtctgaaagctgcgagtcggaacagc
atccctgcctccatgacgccctcagcagctctgactggctgctggaggaacctggatggt
caaggcgtcacgctgctctcagtaggactggctctgctggctgctctagttcttttttat
ctttga
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