Tachysurus fulvidraco (yellow catfish): 113648463
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Entry
113648463 CDS
T08119
Symbol
eme1
Name
(RefSeq) crossover junction endonuclease EME1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03440
Homologous recombination
tfd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113648463 (eme1)
03460 Fanconi anemia pathway
113648463 (eme1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113648463 (eme1)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
113648463 (eme1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
PDDEXK_14
Motif
Other DBs
NCBI-GeneID:
113648463
NCBI-ProteinID:
XP_027011460
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Position
8:4185414..4199798
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AA seq
511 aa
AA seq
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MGSDSRGFRISDGDSSDSEQLPVIDFSQKPKTLLRSDSSDSAMTHPVSARPAGGNVFTVS
SDSEEEEEEVFVPLALRLKQKAVAKSTCQSQNSSVSQSKSLKANISTAQSVKVVQEDPSP
VRCHRNEDEDAGIRKRKRTLEETEACREEALRRKAEREKQHGEKERLRVEKKALTDAVKA
MRPDECIKHMVAVVDPGLLQMEGGGDLLTSLHTLGCSCAIEKQTLPRSVSWLRRTPCPRS
GEVMCVPESQAVLQVPVDDLISMVHSSTQEQRSRGERDHGVTLTAWVLRLMERNSNRNLS
LSVIDIERYFKSQNAKGQQKFRDVVLGDETKKRKKKDMEQLPNVSRVELEEALVDLQLHT
GVQVHFHSTWKDFTNYVTMSTKAVAEAPFKWERDKTGFSFCLESEWAGGQKVERTGKGLL
QVWKRQIQQLNRVSADMATAILSAYPSPQLLIQAYTQCRSDRQKAALMSDVLIRRGEGVT
STTRRIGPELSKRMFLLMMSSDPEQNLDSVA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgacagccgaggatttcgtatcagtgacggcgactccagcgactcagagcag
cttcctgttatagatttctcccaaaaaccaaagactttgcttcgttcagactcctcagac
tcggcgatgactcacccggtctcggctcgacctgctggaggaaacgtcttcacggtcagc
agtgacagtgaggaggaggaggaggaggtttttgttcctctggctctcaggctgaaacag
aaagctgtagctaagagcacatgccagagtcagaattcatctgtgagtcagagcaaaagt
ttgaaggcgaacatctcaactgctcagagtgttaaagtcgtccaggaggacccgagccct
gtgaggtgtcacagaaacgaggacgaggatgctgggattcggaaacgcaaacgcaccttg
gaggagacggaggcgtgcagagaagaggcgctgcgcaggaaagccgagcgggagaaacag
cacggagagaaggagaggctgagagtggagaagaaagctctgactgatgctgtaaaggcc
atgaggccagacgagtgcatcaaacacatggtggcagtggtggatcctggtctactgcag
atggaaggtggaggtgatctcctgacttcattgcacacattgggatgcagctgtgccatt
gagaagcaaacactaccacggagtgtgtcctggcttagacgcacaccttgtccgcggagt
ggagaggtgatgtgtgtcccagaatctcaggcggtgctgcaggtcccggtggacgacctc
atcagcatggttcacagctccacacaggagcagaggagtagaggagagcgtgaccatggt
gtaaccctcactgcttgggtgctgcgtctcatggagagaaactccaacagaaatctcagt
ctgtctgtgatcgatatcgagagatattttaagagtcagaacgctaagggtcagcagaag
tttcgggacgtggtgctgggagacgagacgaagaagaggaaaaagaaagacatggaacag
cttcctaatgtctcccgggtggagctggaggaggctttagtcgacctccagcttcacact
ggggtccaagtccattttcactcgacctggaaagacttcactaattatgttaccatgtca
accaaggcagtagctgaagcaccgttcaagtgggagcgagacaagacaggttttagtttt
tgtctggagagcgagtgggctggtggtcagaaggtggagcgaacagggaaaggacttctt
caggtgtggaagaggcagatccagcagctgaaccgcgtcagtgcagacatggctacagcc
atcctcagtgcatatccctctcctcagcttcttattcaggcgtacacacagtgcaggtca
gaccgccagaaagccgccttgatgtcagacgttctgatccggcgtggagaaggagtgacg
tcgaccacacgcaggatcggcccagagctgtccaagcgaatgttcctgctgatgatgtca
tcagacccagagcagaaccttgattctgtggcatga
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