Tachysurus fulvidraco (yellow catfish): 113649020
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Entry
113649020 CDS
T08119
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd02010
ABC transporters
tfd04145
Phagosome
tfd05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113649020
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113649020
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113649020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tfd02000
]
113649020
Enzymes [BR:
tfd01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
113649020
Transporters [BR:
tfd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
113649020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
MFS_1
AAA_21
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-GeneID:
113649020
NCBI-ProteinID:
XP_027012378
LinkDB
All DBs
Position
18:11766497..11772707
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AA seq
714 aa
AA seq
DB search
MSKLLVAAFSVFTDLVVVYVLDLVGTHLRGKVRSLDGGGDLVRQWTEAVLRCALLCSLFY
CRDVRGRLMKRWVMAHCFITPVYETGRLTLFGNWPMEKFAMWMVGSVAAALGCLFWETLL
PESNEESRGKENKQKARDLFLRVIHLYKPDYLFLFGASLFLALAVLCEMFIPLYTGKLID
ILQTKYSWDEFLSAIILMTFFSFGSSFSAGCRGGLFMCAIGRFICRVKHQLFSCLLKQEI
GFFETTKTGDITSRLSTDTNLMARAVALNVNVLLRTLIKTLGMLYLMSSLSWKLTVLTLM
ETPLTGLLQNIYDTHYQRLSIKVQDSIARANDAAGEAVSSIRTVKSFNAMQSEKNRYDER
LMDTHNIKTQRDTVRALYLLVRRLTELGVKVAMLYYGHLFVTYGQMTTGNLVSFILYHSD
LADSIRTLIYIFGDMLNSVSASGKVFEYLDRRPEVSTDGTLKPEELKGHISFQNITFAYP
TRPDRNVLEDFSLELKPGKMTALVGISGGGKSTCVSLLQKFYQPQHGHILLDGQPLQKYQ
HKYLHNKLVAVGQEPVLFSGTIRDNIAYGLPDCSLAKIEEAARKANAHEFICQFQKGYDT
DVGERGSLLGSSQKQRIAIARALIRQPQVLLLDEITSFLDPKSEQMVQQALANSPNLTSL
VIAHRLKTIEKADQIIVIDQGVILEQGSHQELMEKKGHYYKLKEKLFTENNSNT
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacttttggtggctgctttttctgtattcacggatttggtcgtcgtctatgtg
ctggacctggtgggcacacacttgagaggtaaagtgaggagtttggacggtggaggtgac
ctggtgagacagtggactgaggcggtgttgcgatgcgcgttgctctgctcactgttctac
tgcagggatgtgagagggcggctgatgaagcgatgggttatggcccactgttttatcact
cctgtgtatgaaacaggtcgtttgactctgtttggtaactggccgatggaaaagtttgct
atgtggatggtcggcagtgtggctgctgctttgggatgcctcttttgggagacgctctta
ccagagtctaatgaggaaagcagaggcaaagagaacaagcagaaagctcgagatctcttc
ctgagagtgatccacttgtacaaacctgactacctgtttttattcggggcatctctattt
ctagccttagctgtcctttgtgagatgtttattccactctacacaggaaagttgatcgat
atcctgcagactaagtacagctgggatgaatttctctcagcaataatattaatgacattc
ttctcttttggaagttcttttagcgcaggttgtcgaggaggcctgttcatgtgtgctatc
ggcagatttatttgtagggtgaagcatcaactcttcagctgcttacttaagcaggaaatt
ggcttctttgagactacaaagacaggtgacatcaccagcagactgtccacagacactaat
ctcatggcccgagctgtagcccttaatgtgaacgtccttctgagaaccctgattaaaact
ctggggatgttgtacctgatgtctagtctgtcctggaagctcactgtactgacactgatg
gagacgcctttaactggactactacagaacatctatgacacacattaccagagactttca
ataaaggtgcaggactccatagcaagggcaaatgatgccgcaggagaggctgtgtcaagc
atcaggactgtaaagagctttaacgcaatgcagagtgagaagaatcgctatgatgagagg
ctgatggacacgcataatataaagacgcagcgggacacagtcagagcattgtacctgctg
gtgaggaggctcacagagttgggagtgaaggtggctatgttatactatggtcacttgttt
gtaacgtatggacagatgaccacaggaaatctggtctcattcatcctctaccattcagat
cttgcagacagcattcggactttgatttatatatttggagacatgctgaactctgtgagt
gcctctgggaaggtgtttgagtacctggatcgcagacctgaagttagcacagatgggacc
ctgaagccagaggaactgaagggacacatcagcttccagaacatcaccttcgcatatcca
acacgtcctgaccgcaatgtgcttgaggacttcagtttggagctgaagcccgggaaaatg
actgctctggtggggatttccggaggtgggaaaagcacttgtgtcagtctgctacagaag
ttttaccagccacagcatggacacatcctgctagatggacagcctctacagaaataccag
cacaaatacctgcacaacaagcttgttgctgtgggtcaggagcctgttctcttctccggc
accatacgggacaatatcgcttatggattaccagactgttcactcgcaaaaatagaggaa
gcagcacgcaaagccaatgcacatgaattcatctgccagtttcagaaaggttatgacaca
gatgttggagaacgaggaagtcttcttggtagcagtcagaagcagcgcatcgcgattgct
agagcactaatcagacagccacaggttttattactggatgagatcacaagctttctagat
cctaagagtgaacaaatggtccaacaagccctggccaactcccccaatctgacctcactg
gtgattgcacacagactgaagaccattgagaaggcagaccagattattgtgattgaccag
ggggtaattttggagcaaggcagccaccaggaactcatggagaagaagggacattactac
aaactgaaagaaaaactctttactgaaaataacagtaacacttaa
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