KEGG   Tachysurus fulvidraco (yellow catfish): 113651183
Entry
113651183         CDS       T08119                                 
Symbol
pole2
Name
(RefSeq) DNA polymerase epsilon subunit 2
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03030  DNA replication
tfd03410  Base excision repair
tfd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113651183 (pole2)
   03410 Base excision repair
    113651183 (pole2)
   03420 Nucleotide excision repair
    113651183 (pole2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tfd03032]
    113651183 (pole2)
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113651183 (pole2)
Enzymes [BR:tfd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     113651183 (pole2)
DNA replication proteins [BR:tfd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    113651183 (pole2)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      113651183 (pole2)
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT PUF_NOP9
Other DBs
NCBI-GeneID: 113651183
NCBI-ProteinID: XP_027015731
LinkDB
Position
12:4631455..4640654
AA seq 527 aa
MDARRLKTKVTAAFKMRGLMLRPEASRYLVEVLEAVSEVDLEDVIERILDGVEKQPLSSS
MIELSVAETAVQDCSQSCDETIDNVFNIIGAFDVPRFIYSTERKKFVPINMTSHSIPSVC
SQARDKAELFRERYTILHQRIHRHELFTPPVIGVAADERRNKFQLKTVEALLGSTTKLGE
VIVLGMITQLKEGKFFLEDLTGSVQLDLSMAQFHSGLYTESCFVLAEGWYEDSVFHVSAF
GFPPIEPSSTTRAYYGNMNFFGGPSTIAVKASTKLKQLEEENVDAMFVIISDLWLDSVEV
LEKIQTMFSGYSAMPPTCFIFCGNFSSAPYGKSQIKSLKESLKALADLICEHPNIHHSSR
FVFVPGPEDPGPSTILPRPPLAEHITEEFRQQIPFSVFTTNPCRIQYCSQEIVVIREDLV
NKMCRNCLRLPSQNLDIPNHFVKTILSQGHLTPLPLFVSPVYWAYDYALRVYPVPDVVIF
ADKYDPFNISNSDCLCINPGSFPKSEFSFKVYYPSNRTVEDSKLQGI
NT seq 1584 nt   +upstreamnt  +downstreamnt
atggacgcacggagactaaaaacaaaagttacagccgctttcaagatgcgaggcttaatg
ttgcgacctgaagccagcagatatctggtggaggtgttggaggctgttagtgaagtggat
ctcgaggatgtcattgagcggattctggatggagtcgaaaaacaacccttgtcctcgagc
atgattgagctctctgtagctgagactgctgtgcaggactgcagtcagtcatgtgatgaa
actatagacaacgtttttaacatcattggagcttttgatgtgcctagatttatatacagc
acagaaaggaagaaatttgtccctattaacatgaccagccattcaattcctagtgtgtgc
agccaagctagagataaggctgagctctttagggaacgctataccatcctgcatcagcgg
atacatagacatgaactttttacaccacctgtgattggtgtggctgcagatgaaaggaga
aataaattccagttaaagactgtggaggctcttttaggaagcactacaaaactgggtgaa
gttattgtcctgggtatgatcacacagcttaaagagggcaagttttttcttgaagatcta
actggctcagtgcagttggacctttccatggcacagttccacagtgggctgtacaccgag
tcttgctttgtcttggctgaagggtggtatgaagactcagtcttccatgtcagtgccttt
gggtttccaccaattgagccttcctccactacgagggcatattatggtaatatgaatttc
ttcgggggtccatctacaattgccgtgaaagcctccaccaagctgaagcagcttgaagag
gaaaatgtggatgccatgtttgttattatttctgacttgtggctagacagtgtggaggtc
ctggagaaaatacagaccatgttttcaggctattcagcaatgcctcccacgtgcttcatt
ttctgtgggaacttctcctctgccccatatggcaaaagtcagatcaagtcccttaaagag
tctttaaaagcactggctgatttaatttgtgagcatcccaacattcaccacagcagtcgc
tttgtgtttgttcctggccctgaggaccctggacccagcaccattttgcccaggcctccc
ttagctgaacatatcactgaagaatttagacagcaaatccctttctctgtcttcaccaca
aacccatgcaggatacagtactgcagtcaagagatagtggtaatccgagaagacctggtc
aacaagatgtgtaggaactgcttgcgactccccagccagaacctcgacatcccaaaccat
tttgtgaagactatcttgtctcagggacacctgactccacttcctctgtttgtcagtcca
gtgtactgggcatatgactatgccttacgtgtctatcctgttcctgatgttgttatcttt
gctgataaatatgatcccttcaatatctccaactcagattgcctctgcatcaacccgggc
tcttttccaaaaagtgaattttcattcaaggtgtattatccatcaaacagaacagtggag
gacagcaaattgcaaggaatttga

KEGG   Tachysurus fulvidraco (yellow catfish): 113653384
Entry
113653384         CDS       T08119                                 
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03030  DNA replication
tfd03410  Base excision repair
tfd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113653384 (pole)
   03410 Base excision repair
    113653384 (pole)
   03420 Nucleotide excision repair
    113653384 (pole)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tfd03032]
    113653384 (pole)
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113653384 (pole)
Enzymes [BR:tfd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     113653384 (pole)
DNA replication proteins [BR:tfd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    113653384 (pole)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      113653384 (pole)
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 CENP-B_dimeris
Other DBs
NCBI-GeneID: 113653384
NCBI-ProteinID: XP_027018753
LinkDB
Position
9:4352875..4381367
AA seq 2283 aa
MVLHNSGRYKGDRGGDQDKQQDDVSNLSAVKRLERSQFTDDMDARYGFERMKEPGEKTGW
LINMHPTEILDDDKRMISAVDYYFIQEDGSKFKVALPYKPYFYIATKKNCEREVVSFLSK
KFQGKISKLETIPKEDLDLHNHLVGLKRTYIKLSFNTVDDLVKVKREISPAVRKNREREK
SNDTYTSMLSSALVGGSVTTDDGDGTSKRMADQLDNIVDMREYDVPYHVRLSIDLKIHVA
HWYNVRYRGSAYPPEIVRRDDLVERPDPVILAFDIETTKLPLKFPDAETDQIMMISYMID
GQGFLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEAALIQRWFEHIHETKPNIFVT
YNGDFFDWPFVETRAAQHNLNMYQEIGFQKDSQGEYKASQSIHMDCLRWVKRDSYLPVGS
HNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFAL
CTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTDDGHVLDSETYVG
GHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTLRHAVEEEEKIPLEQVTNFNQVCD
DIKKKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGA
TCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGKPRAFHELQREEQARHEKK
RLGDYCRKAYKKVHLTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGSHKVWKKKLSA
AQENGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCHTGAN
IITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTSNEKKPKVTISYPGAMLNIMV
KEGFTNDQYQELVDPASLAYQTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNE
DGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKA
ANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVIS
RKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDMDIRSILDWSYYIERLGSAI
QKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISEMFTSEGKRQVANQTEP
GETPDMEDFGAPKRPLQPAILISTKRKRASQGEDSQTESQELELTQSWREILGPPPPMGT
TQEERLVWLRYHKKKWELQIRQRKERRKRRRMLDGEVQPAGGGVIRDGPTTGLGSFLRRT
ARSILDMPWQIVQIAETSHPGLYKLWAVIGTDLHCMKLNIPRVFYVNQRVPKQEEGATYK
KVNRILPRSNVVYYLYQYSVPEDMYQEHINEINADLSAPDVEGVYETQVPLLFRALVQLG
CLCMVNKQVVRALAGREADTFELEHLDMRSLAQFSYLEPGSVRHIYLYHHGQGHKALFGL
FIPSQRKASVFVLDTVRSNQMPNLSTLYGAERTALLEKTSEELLPPEKHQFEVRAENDVK
AIYRAVQRVLHSYKEERRGPTLIAVQSNWELRRLAAGLTVLEEFPVVPVHVTDDISYNVL
DWQRHGARRMIKHYLNLDSCLSQAFDMARYYHLPVGNLPEDISIFGSDLFLARHLRKHNH
LLWLSPTARPDLGGKEADDSRLVMESDERGSVEINSPGCFSTVCVELDLQSLAVNTILQS
QHVNDMEGGASMGVSFDVIQHASLEDMMSGNQGVTAVASYDETALCSNTFRILKSMVVGW
VREITQYHNVYADNQVMHFYRWLRSPNSLLYDPALHRTLLNMMKKIFLQLVAEFKRLGSS
VVYGNFNRIILSTKKRRIDDAIAYVEYITNSIHSREIFHSLSITFSRCWEFLLWMDPANY
GGVKGKLPSSVMYGETGADKRKKGKDGDEEASEDEEDEVDEPEEDRDGEEDEVEDLIESS
WNIMHYLPQAASCQKYFLMIISAYIAAVYHSMREELRRNAPGATPIKRRGGSQATQQPAG
DVSALPGMITFSQEYVSSELTQNIFTITQKIQKKVCGTRSVSQPSEMFPVLPGSHLPLNN
PALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEEAQFRDPCNSYVLPEVICH
QCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQYDTESIEMALVEALQKKLMSYTLQDL
ECAKCRGVKESNMPLYCSCAGDFKLTFSTKSFTEQVDVFRSIAAHYNMNFLLETIDWILR
MNN
NT seq 6852 nt   +upstreamnt  +downstreamnt
atggttttacacaacagtgggagatataaaggtgacagaggaggagatcaggacaagcag
caggatgacgtgtctaacttgtctgccgtcaagcggcttgagcgcagtcagttcacagat
gacatggacgctcgctatggcttcgaacgcatgaaggagccgggagaaaaaactggctgg
ttgatcaacatgcatccgacggagatactggatgatgataagcggatgatcagcgcagtg
gattattattttattcaggaggacggcagcaagtttaaggtggcactgccctataaaccc
tacttctacatagcaactaaaaagaactgtgagagagaagtcgtctcctttttgtcaaag
aaattccaaggaaagatctcgaagctggagacgattcccaaagaggatctcgacctacat
aaccaccttgtgggcctgaagaggacatacattaaactgtccttcaacacggtggacgat
ctggtgaaagtgaagcgagagatctctcctgccgtcaggaagaacagagagagggagaaa
tctaacgacacctacaccagcatgctgtccagcgcgctcgtaggcgggagcgtgacgacg
gacgacggagacggcacgtctaagcgaatggccgaccagctggacaacatcgtggacatg
agggagtacgatgtgccttaccacgtcagactgtccatcgacctcaagatccacgtggct
cactggtacaacgtgcgctacagaggaagcgcgtatcctccggagatcgtacgccgggac
gacctcgtggaaagaccagatcctgtcatcttggcgtttgacatcgagaccaccaaactg
cctctgaagttccccgacgcagaaaccgaccagatcatgatgatctcgtacatgatcgac
gggcagggtttcctcatcaccaacagagagatcgtctccgaggacatcgaggatttcgag
ttcacccctaagccggagtacgagggccctttcacggtgtttaacgaacccgacgaggct
gctcttattcagaggtggttcgaacacatccacgagaccaaacccaacatttttgtcacc
tataacggagacttcttcgactggccattcgtggagacgcgtgcggctcagcacaacctc
aacatgtatcaggagatcggttttcagaaggacagccagggcgagtacaaggccagccag
tcgatacacatggactgcctcaggtgggtgaagagagacagttacctccctgtcggaagc
cacaacctgaaggcagcagcgaaggccaagctgggttacgaccctgtggagctggacccg
gaagagatgtgtcgcatggccaccgaggagccgcagactttagccacctactcggtgtcc
gacgcagtggctacgtactatctctacatgaaatatgttcatcccttcatcttcgccctg
tgcaccatcattcccatggagcctgacgaggtgttgcgtaaaggttcagggactctgtgc
gaggcgttgttgatggtgcaggctttccacgccaacatcattttccccaacaagcaggag
caggtgttcaacaagctcacagatgacggccacgtcctggactcggagacctacgtcggc
ggccacgtggaggccctggagtccggcgtgttccgcagcgacatcccgtgccgcttcaaa
atgaatccggcagcgttcgacttcctgctccagagggtggagcgaacactgcgtcacgcc
gtcgaagaagaggagaaaatcccgctggagcaagtcacgaactttaaccaggtttgcgac
gacatcaaaaagaagctgatctcgttaaaggaagtgccgaacaggatcgagtgcccactt
atttaccatctcgacgtaggcgccatgtatcccaacatcatccttaccaaccgactgcag
ccgtctgccatggtggacgaggcgacctgtgctgcatgtgactttaataaacctggagct
acctgccagaggaggatggcctggcagtggagaggagagatcatgccggccagtcgtagc
gagttccatcgtattcagcaacagttggagtcggagaaattcccccctctgtttcctaac
ggaaaaccgcgagccttccacgagctgcagcgtgaggaacaggcgagacacgagaagaaa
cgtctgggagattactgtcgaaaggcctataagaaggtgcacttgaccaggctggaggag
agagtcactacaatatgtcagagagagaactccttctacgtggacacggtccgagcgttc
cgagatcgccgctacgagtttaaaggatcgcataaggtgtggaagaagaagctgtctgcg
gctcaggagaacggcgacgccgcggaggtgaagcgctgtaagaacatggagatcctttac
gagtctctgcagctcgcgcacaaatgcatcctcaattctttctacggatacgtcatgagg
aaaggagcgagatggtattccatggaaatggctggcatcgtgtgtcacacaggagccaac
atcatcacacaggccagagagctgatcgaacagatcgggagacctttagagctggacact
gacggtatctggtgtgtccttcccaactccttccctgagaactttgtcatcaagaccagc
aacgagaagaagcccaaagtgaccatcagttaccccggggccatgctgaacatcatggtc
aaggaaggcttcaccaacgatcagtaccaggagctggtggacccggcgtcgctcgcctac
cagacgagatccgagaacagcatcttcttcgaggtggacggcccgtacctggccatgatc
ctgcctgcttctaaagaggagggcaagaagctgaagaagagatacgccgtgttcaacgag
gacggctctctggccgagctgaagggtttcgaggtgaagagaagaggagagctccagctc
attaaaatcttccagtcgtccgtgttcgaggctttcctgaaaggcaccaccctggaggaa
gtctacgcctcggtggccaaagtggctgactactggctggacgtgctttacagcaaggca
gctaacatgccagacgcagagctcttcgagctgatttcggaaaaccgctccatgtcccgg
aagctggaggactacggcgagcagaagtccacgtctatcagcacggccaaacgtctggcg
gagtttctcggagatcagatggtgaaggacgcggggctgagctgtcgctacgtcatttct
cgcaaacccgagggctctcccgttaccgagagggcgattcctctggccatattccaggcc
gaacctagcgttaagaagcacttcctgcgcaagtggctgaagatgcccagcctccatgac
atggacatcagatctatcctggactggagttactacatcgagagactgggcagcgccata
cagaagatcatcaccattccagcagcactacagcaggtgaagaacccggtgcctcgcgtg
cgccatccggactggctgcataagaagcttctggaaaagaacgacatctacaaacagaag
aaaatcagtgagatgttcaccagtgaggggaagagacaggtggccaatcagaccgagcca
ggtgagactcccgacatggaggattttggagctccaaagcgcccccttcagcctgctatc
ctcattagtactaagaggaagcgagcgtctcagggtgaagacagccagactgagtcccag
gagctggagctcacacagtcctggagagagatactgggtcctccgccacctatgggtaca
acacaggaagagaggctggtgtggctgcgctaccataagaagaagtgggagctgcagatc
cgccagaggaaagagcgcaggaagagacggcgaatgcttgacggagaggttcagcctgca
gggggcggcgtgatcagggacggtccgaccacagggttggggagcttcctacgcaggacg
gctcggagcatcctggacatgccctggcagatagtacagatcgctgaaaccagtcaccca
ggactgtataagctgtgggcggtgatcggcaccgacctgcactgcatgaagcttaatatc
ccacgagtgttttacgtcaatcagagagtccccaagcaggaagaaggagctacttataaa
aaggtcaaccggattttgccgcgctccaacgtggtgtattacctgtaccagtactccgtg
cctgaggacatgtatcaggaacacatcaatgagatcaacgcagacctttcggccccagac
gtcgagggcgtctacgagacgcaggtgccgctgcttttccgggcgctggtgcagctcggc
tgcttgtgtatggtcaataagcaggtggtgagagcgctggccggacgagaagccgacacc
ttcgagctggagcatctggatatgaggtcgctcgcccagttcagctacctggagccaggc
agcgtgagacacatctacctgtatcatcacggtcagggccacaaggctctgtttggcctc
tttatcccctcgcagcgcaaagccagcgtcttcgtcctggacacggttcgcagcaaccag
atgccaaacctgagcacgctgtacggagccgagcgcacggcgctgttggagaaaacatcc
gaggagctgctgcctcccgagaagcaccagtttgaagtgcgtgctgagaacgacgtgaag
gcgatttaccgcgcagtgcagcgcgttctgcacagctataaggaggagcgtcgtggtccc
actctcattgccgtgcagtctaactgggagctccggcgtctggcggcaggattgaccgtg
ctggaggagttccctgtggttcccgtgcacgtgacggacgacatcagctacaacgtgctg
gactggcagcgacacggcgcacgccgcatgatcaaacactacttaaacctggacagctgt
ctttcacaggctttcgacatggccaggtattaccacttgcccgttgggaacctgcccgag
gacatctctatattcggctcggacctctttctggcacgtcacctgcggaagcacaaccac
ctgctgtggctgtcacccacagcgagacccgacctcgggggcaaggaggccgacgacagc
cggctggtgatggagagcgacgagcgaggctcggtggagatcaactctccgggctgcttc
tccacagtgtgtgtggagttggatcttcagagcttagcggtgaacaccattctccagtcg
cagcacgtgaacgacatggagggcggagccagcatgggcgtgagtttcgatgtcattcag
cacgcatcgctggaggacatgatgtcaggaaaccagggggtgaccgctgtggctagttat
gatgagactgcgctctgctccaacacattcaggatcctgaagagtatggtggttggctgg
gttcgggagatcacacagtaccataacgtgtatgcagataatcaggtgatgcacttctac
cgctggctgcgttcccccaactctctgctgtacgacccggcgctgcaccgcacgctgctc
aacatgatgaagaagatcttcctccagctggttgccgagtttaagcggctcggttcctct
gtggtctatggaaactttaaccgcatcatcctcagtaccaaaaagcggcgcattgacgac
gccatcgcttacgtggagtacatcaccaacagcatccattcacgggagatcttccactcc
ctgtccatcaccttctcccgatgctgggagttcttgctgtggatggatccagctaactac
ggaggagtgaaagggaagttgccctccagcgtcatgtacggagagaccggcgctgacaag
aggaagaaaggaaaggacggtgacgaggaggccagcgaggatgaggaggatgaggtcgat
gaaccagaggaagaccgagacggtgaggaggatgaggtggaggacctgattgagagcagc
tggaacataatgcattacctgcctcaggctgcttcctgtcagaaatacttccttatgatc
atctcagcctacattgccgccgtgtatcacagcatgagggaggagctcaggagaaatgct
ccaggagccacgcccataaagaggcggggcggaagccaggcgacccaacagcctgccggc
gatgtcagcgcacttcctggcatgatcacgttctcccaggagtacgtgtcgagcgaactc
acccaaaacatcttcaccattacacagaagatccagaaaaaggtgtgtgggacacgcagc
gtgtctcagccgtctgaaatgttccccgtgctgccagggtcacatctgcccctcaacaac
cctgctctggagttcatcaaatacgtctgtcaggttctgtcgctggacgctaacatagtg
aaccaggtgaacaagctgaagcgggatctcttgcgcttggtggacgtcggcgagttctca
gaggaggctcagttccgtgacccctgcaactcctacgtcctgccggaggtcatctgccac
cagtgtaacttctgccgtgacctcgacctctgcaaggacccctccgtcgcccaggacggc
tcggtcctgccgcagtggttctgctccaactgccaggcgcagtacgacaccgaatctata
gagatggctcttgttgaagctctgcagaaaaagctgatgagttacacgctgcaggacctg
gagtgtgctaaatgcagaggggtgaaggagtccaacatgcctctttactgcagctgtgca
ggagacttcaagctgaccttcagcacaaagagcttcaccgagcaggttgatgtgttcaga
agcatcgctgcacattacaacatgaacttcctgcttgagaccatcgactggatcctgagg
atgaacaattag

KEGG   Tachysurus fulvidraco (yellow catfish): 113655080
Entry
113655080         CDS       T08119                                 
Symbol
pole3
Name
(RefSeq) DNA polymerase epsilon subunit 3
  KO
K02326  DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03030  DNA replication
tfd03082  ATP-dependent chromatin remodeling
tfd03410  Base excision repair
tfd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113655080 (pole3)
   03410 Base excision repair
    113655080 (pole3)
   03420 Nucleotide excision repair
    113655080 (pole3)
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    113655080 (pole3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tfd03032]
    113655080 (pole3)
   03036 Chromosome and associated proteins [BR:tfd03036]
    113655080 (pole3)
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113655080 (pole3)
Enzymes [BR:tfd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     113655080 (pole3)
DNA replication proteins [BR:tfd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    113655080 (pole3)
Chromosome and associated proteins [BR:tfd03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    113655080 (pole3)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      113655080 (pole3)
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone CENP-T_C BUD22 DUF4746 CIS_TMP RNA_pol_3_Rpc31 PPP4R2 ECM10 Bromo_TP CDC45 PFF1_TM
Other DBs
NCBI-GeneID: 113655080
NCBI-ProteinID: XP_027021172
LinkDB
Position
26:8678429..8681474
AA seq 150 aa
MAERPEDLNLPNAVITRIIKEALPDGVNVSKEARRAISQAASVFVLYATSCANSFAMKAK
RKTLNAGDVMSAMEEMEFERFLPPLREALEAYKKGQKGKKEASEQKRKDKEKKNGTEEND
KSREEEEEEEEHMEDEQDGENEGDEEDVEN
NT seq 453 nt   +upstreamnt  +downstreamnt
atggcggagagaccagaggacctgaacttgcccaacgctgtcatcacccgcattatcaag
gaggctttaccagatggtgtcaatgtgtccaaagaggcaagaagagcgatatctcaagca
gccagcgtatttgttttatatgcaacatcatgtgccaacagttttgctatgaaagccaaa
aggaagactctaaatgctggggatgtgatgtccgctatggaggagatggagtttgagcgt
ttcttgccacctctgcgtgaggctctcgaggcctacaaaaagggccagaaggggaaaaaa
gaggcgtcggagcagaaacgcaaggacaaagagaagaagaacggcacagaggaaaatgac
aagagcagagaggaagaagaagaggaagaggagcacatggaggatgagcaggatggagag
aatgagggagatgaggaggatgtggagaactga

KEGG   Tachysurus fulvidraco (yellow catfish): 113657934
Entry
113657934         CDS       T08119                                 
Symbol
pole4
Name
(RefSeq) DNA polymerase epsilon subunit 4
  KO
K03506  DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03030  DNA replication
tfd03410  Base excision repair
tfd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113657934 (pole4)
   03410 Base excision repair
    113657934 (pole4)
   03420 Nucleotide excision repair
    113657934 (pole4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tfd03032]
    113657934 (pole4)
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113657934 (pole4)
Enzymes [BR:tfd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     113657934 (pole4)
DNA replication proteins [BR:tfd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    113657934 (pole4)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      113657934 (pole4)
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone CENP-T_C TFIID-31kDa TAF
Other DBs
NCBI-GeneID: 113657934
NCBI-ProteinID: XP_027025913
LinkDB
Position
2:25561198..25564007
AA seq 125 aa
MATGVAVSVCASEPEPERSEEEVRGTEPDEEHQQHPGPVVGPQHRLAKLPLSRIKALMKA
DPDVSLASQESVFIIAKATELFVEMISKDALVYAQQGKRKTLQRKDLDNAIEAADEFAFL
EGTLD
NT seq 378 nt   +upstreamnt  +downstreamnt
atggccacgggagtagcggtgagtgtatgtgcctcggagcctgagcctgagcggagtgaa
gaggaagtgcggggaacagaaccagatgaggagcaccagcagcaccccgggcctgtcgtg
ggccctcaacaccgcctggctaaattacccctgtcccggattaaagcccttatgaaggct
gaccctgacgtaagtctggcgagccaggagtctgtgttcatcatagctaaagccacggag
ctgttcgtggaaatgatatccaaggatgcgcttgtttatgcacagcaaggaaaaaggaaa
actctacagaggaaagatctagacaatgctattgaggcagcagacgagtttgcatttcta
gagggtaccttggactaa

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