Tachysurus fulvidraco (yellow catfish): 113652758
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Entry
113652758 CDS
T08119
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113652758 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113652758 (fan1)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
113652758 (fan1)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
113652758 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
BsuBI_PstI_RE
GIT1_C
SduA_C
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
113652758
NCBI-ProteinID:
XP_027017826
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All DBs
Position
13:complement(14516944..14526341)
Genome browser
AA seq
971 aa
AA seq
DB search
MGPKPGKSRSKDHARPLRRLSLAKNAHQQGNAKLQKGPSITSFFKNTPPSKLACPLCGKF
IPRFKINEHIDSQCQDFLEENDTQAASASDNEQVKTSRHFLNNAPQSAEEEKNASMHEND
QDRKTSPYFKKNGTAGQESPNNSSPHSGEPKIVSLGRLSSKLSKKGLFSLEDSKIPSPQT
SIKEEPVLCEPSSSQKENFDENVSLNAEVITSCSDLSSQVPSENRVEPCVEEIKQATSKL
DSLGPDTFQSANTAASLRLMKRKKEETPGAGVATKMQKKTRFSGKRSAKSASADPLPDRS
SDLQQDASNSSVNHGSLRRPYYLQNFLTVLGTVLENKDDRALFSEEELSSIQRFKQLSVP
GQMLYVRLFQRKLKWLQVSKLDYAEISSDLNPVVQELVSCAFLQTESELTEIQDVLDLLP
APELRSLAKTFHLGGPGSSSQKQQLVEGLLLLSKQRSFFSLAPGQSNTGAVILKRAKQLA
GSCIYLCREPHAMFSRVLLLFSLTDTLEEEEMASGGQGQLYTILLVNSGRLAFPAYTVQR
SAQVFRDREDLIRYEAAMRTLQEVMTAMQAGCWEDALALYTSAKTSWQNLKQTYDLSWQE
QLPLFLRCFTVGWTYTRILSRGVEILQRLRRYEDAVDELRSLLSQSMFCPDSRGRWWDRL
ALNLQQHLKCHEQAIHGIRDGLNDPLVRTGHRLSLHQRATRMKESASFKKYRLLLRDLPS
ISVQSVTHVTIRGQLFPHEGGTGKSVFLRPAVGHEGSGEGCDAMVICSVEELALAHYREL
GFDQGIHGEGSTFSTLFGLLMWDIVYMNVLDVFRTSYQTCPLDLYTDCFYENRKEAIEAR
AELLSEASTETLQELLAEVWNSQEGRVCALVNWERFSCLQQAQSLVACLGGQFLSGVVLK
MAKDYRHSKGGLPDLVVWNTSNNSYKLVEVKGPNDRLSQKQQIWLDELQKLGADVEVCHV
TAIGARGARLE
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccaagcctggtaaaagtcgatccaaagaccatgccaggcccctaagaagactt
tctctagcaaaaaatgctcatcagcagggtaatgcaaaactgcagaaaggtccttctatt
acttcatttttcaagaacacgccaccctcaaaactggcctgcccgctttgtggcaagttc
atacctcgtttcaaaatcaatgaacacatcgactcacagtgtcaagactttcttgaggaa
aatgacacacaggcagcatctgcaagtgacaatgaacaggtgaaaacatccaggcacttt
ttaaataatgctcctcagagtgcagaagaagagaaaaatgcaagcatgcatgaaaatgat
caggatagaaaaacaagcccatattttaaaaagaatggcacggcagggcaagaatcacca
aacaacagttctccccattctggagagcccaagatagtcagtcttgggcggttgtcttca
aaactctcgaaaaaggggttattttctttagaggactctaaaattcccagcccccaaaca
tctattaaagaagaaccagttttatgtgagccaagtagttcacaaaaagaaaactttgat
gagaatgtaagccttaatgctgaagtcatcactagttgttcagatttaagttctcaggta
ccaagtgaaaatcgtgttgaaccttgtgttgaagaaataaagcaggccacatcaaaatta
gactccttgggtcctgatacctttcagtcagcaaacactgctgcttcgttgagattaatg
aagaggaagaaagaagagactcctggtgcaggggtagccacaaaaatgcagaagaaaaca
cgattttcagggaaaagaagtgccaaatctgcaagtgctgatccattaccagatagaagc
agtgatcttcaacaagatgctagcaactcctctgtgaaccatggttccctcagacgacca
tactatcttcagaacttcctaactgttctcggaacagtgctggagaataaggatgaccga
gcactcttcagtgaggaggaactctcatctatccaaaggttcaagcagctatcagttcct
ggacagatgctatatgtgcgtctgtttcagaggaagttaaaatggctgcaagtgagcaaa
ctagattatgctgagattagttcagacctcaatcctgttgtgcaagaacttgtctcctgt
gccttcctccagacagagtctgaactcacagagatccaagatgtattagatcttctacct
gctccggagctccgaagtctggccaagactttccacctaggaggaccagggagcagtagc
cagaaacagcagctggtggaagggcttctccttttgtccaaacagcgctccttcttttct
cttgcccctggccaaagcaacactggtgcagtcattctcaaaagggcgaaacagctagca
ggctcctgtatttatctgtgccgggaaccccatgctatgttctctcgtgtcctcctactt
ttctcccttactgacactctggaggaggaagaaatggcatcagggggtcaaggacaactc
tacaccattctgctggtcaactctggacgtctggcttttcctgcctacacagttcagcgg
tctgcacaagtgtttagagacagggaagatttaatcagatatgaagctgccatgcgaacc
cttcaagaggtgatgacagcaatgcaagctggctgctgggaggatgctttagccctttat
acttctgcaaagactagctggcaaaacttgaagcaaacttatgacttaagttggcaggag
cagttacctttgttcctgcgttgctttacagtcggttggacatatacacgtatattgtct
cgaggagttgagatactacaaaggctgcgtcgttatgaggatgcagtggatgagctacgt
tctctgctgtctcagtcaatgttctgtccagacagcagagggcgctggtgggacagactg
gcactcaatctccagcagcacctaaaatgccatgagcaggctatccacggcatcagggat
ggattgaatgatccacttgtacggacaggtcaccgtttgtcactgcaccagagagccacc
agaatgaaggagtcagcgagttttaagaagtaccgcctgctccttcgagaccttccttct
atcagtgtgcaaagtgttactcatgttactattcgaggccagctttttcctcatgagggt
ggaacaggcaaatctgtgttcctcaggcctgctgttgggcatgaaggctctggagaagga
tgtgatgccatggttatatgctctgtcgaggagctggctttggcacactacagagaactt
ggcttcgatcaaggcattcatggtgaaggctctacattctctactttgtttggtcttctg
atgtgggacattgtctacatgaatgtcttggatgtcttcagaacatcatatcagacatgt
cccctggacctgtacactgactgtttctatgagaatcggaaggaggctatcgaggcccgg
gctgagctgttgtccgaggcatccacagaaacactgcaggagctactggctgaagtgtgg
aattcacaggagggaagagtttgtgcacttgtcaactgggagagattctcttgtcttcag
caagcccagagcttagtagcatgtctaggaggacagtttttaagtggtgtggtgcttaaa
atggcaaaggactacagacatagcaaaggaggacttcctgacctggttgtgtggaacacc
tcaaataacagctataagctggtggaggtgaagggccctaatgaccgtctgtctcagaaa
caacagatctggctggatgagttacagaagctgggtgctgatgttgaagtgtgtcacgtc
actgctattggagctcgtggagcgcgactggaatag
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