KEGG   Tachysurus fulvidraco (yellow catfish): 113656554
Entry
113656554         CDS       T08119                                 
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03013  Nucleocytoplasmic transport
tfd04141  Protein processing in endoplasmic reticulum
tfd04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113656554 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113656554 (sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    113656554 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tfd03019]
    113656554 (sec13)
   04131 Membrane trafficking [BR:tfd04131]
    113656554 (sec13)
Messenger RNA biogenesis [BR:tfd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     113656554 (sec13)
Membrane trafficking [BR:tfd04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    113656554 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    113656554 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    113656554 (sec13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd EIF3I WD40_Gbeta ANAPC4_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_EML Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_WDR36-Utp21_2nd
Other DBs
NCBI-GeneID: 113656554
NCBI-ProteinID: XP_027023669
LinkDB
Position
2:7160638..7167309
AA seq 320 aa
MVSIMNTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPTYGNILASCSYDRKVIIWKEENGTWDKMYKYTGHNSSVNSICWGPYDFGLIL
ACGSSDGAISILTFTGDGQWDIKKINNAHTIGCNAVSWAPAVVPGSLIDQPTGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPSGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVGGQWACIS
DVNKGQGAVNSITDGQQNEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttccatcatgaacaccgtggatacctcccatgaggatatgattcatgatgctcag
atggactactatggcacaagattggcgacctgctcctctgatcgatctgtgaagatcttt
gatgttaagaacggcggccagattcttgtggcagacctgaggggacacgaaggtccggtg
tggcaagtggcctgggcacatcccacctacggcaacattctggcctcgtgctcctatgac
agaaaagtgatcatttggaaagaagaaaatgggacatgggataagatgtacaagtacacg
ggccacaactcctcggtgaactctatttgctggggaccctatgacttcggtttaatcctg
gcctgcggaagctcagacggtgccatctcgattctgaccttcactggcgatgggcagtgg
gacatcaagaagatcaacaatgcacacactattggctgcaatgcagtaagctgggctcca
gctgttgttccgggcagcctcatagaccagcctacaggacaaaaacccaactatgtgaag
agatttgtctctggaggctgtgacaacttggtcaagctttggaaagaggaagatgggcag
tggaaggaggaccagaagctggaggcccacagtgattgggtgagagatgtaggttgggct
ccatctatcggtctacctaccagcacaattgccagctgctcacaggatggtcgtgtgttc
atctggacatgtgacgatccttctggaaacacctggactgccaaactcctgcacaaattc
aacgatgttgtctggcatgtcagctggtccatcacaggcaacatcctggccgtgtctggt
ggagacaacaaggtgaccctgtggaaggagtctgtgggcggacagtgggcttgcattagc
gacgtgaataaaggccaaggggccgtgaactccattacagacggccagcagaacgagcag
tga

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