Tachysurus fulvidraco (yellow catfish): 113656554
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Entry
113656554 CDS
T08119
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03013
Nucleocytoplasmic transport
tfd04141
Protein processing in endoplasmic reticulum
tfd04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113656554 (sec13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113656554 (sec13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
113656554 (sec13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113656554 (sec13)
04131 Membrane trafficking [BR:
tfd04131
]
113656554 (sec13)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113656554 (sec13)
Membrane trafficking [BR:
tfd04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
113656554 (sec13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
113656554 (sec13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
113656554 (sec13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
113656554
NCBI-ProteinID:
XP_027023669
LinkDB
All DBs
Position
2:7160638..7167309
Genome browser
AA seq
320 aa
AA seq
DB search
MVSIMNTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPTYGNILASCSYDRKVIIWKEENGTWDKMYKYTGHNSSVNSICWGPYDFGLIL
ACGSSDGAISILTFTGDGQWDIKKINNAHTIGCNAVSWAPAVVPGSLIDQPTGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPSGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVGGQWACIS
DVNKGQGAVNSITDGQQNEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtttccatcatgaacaccgtggatacctcccatgaggatatgattcatgatgctcag
atggactactatggcacaagattggcgacctgctcctctgatcgatctgtgaagatcttt
gatgttaagaacggcggccagattcttgtggcagacctgaggggacacgaaggtccggtg
tggcaagtggcctgggcacatcccacctacggcaacattctggcctcgtgctcctatgac
agaaaagtgatcatttggaaagaagaaaatgggacatgggataagatgtacaagtacacg
ggccacaactcctcggtgaactctatttgctggggaccctatgacttcggtttaatcctg
gcctgcggaagctcagacggtgccatctcgattctgaccttcactggcgatgggcagtgg
gacatcaagaagatcaacaatgcacacactattggctgcaatgcagtaagctgggctcca
gctgttgttccgggcagcctcatagaccagcctacaggacaaaaacccaactatgtgaag
agatttgtctctggaggctgtgacaacttggtcaagctttggaaagaggaagatgggcag
tggaaggaggaccagaagctggaggcccacagtgattgggtgagagatgtaggttgggct
ccatctatcggtctacctaccagcacaattgccagctgctcacaggatggtcgtgtgttc
atctggacatgtgacgatccttctggaaacacctggactgccaaactcctgcacaaattc
aacgatgttgtctggcatgtcagctggtccatcacaggcaacatcctggccgtgtctggt
ggagacaacaaggtgaccctgtggaaggagtctgtgggcggacagtgggcttgcattagc
gacgtgaataaaggccaaggggccgtgaactccattacagacggccagcagaacgagcag
tga
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integrated database retrieval system