Tachysurus fulvidraco (yellow catfish): 113657593
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Entry
113657593 CDS
T08119
Symbol
slx1b
Name
(RefSeq) structure-specific endonuclease subunit SLX1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113657593 (slx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113657593 (slx1b)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
113657593 (slx1b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
T5orf172
zf-RING-like
zf-HC5HC2H_2
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
113657593
NCBI-ProteinID:
XP_027025312
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All DBs
Position
1:complement(29865021..29868218)
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AA seq
263 aa
AA seq
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MVVEVESFYGVYMLYCKNPKFKGRIYIGFTVNPERRIVQHNAGRHKGGAKRTSGRGPWEM
VLIIHGFPSDIAALRFEWAWQHPHISRRLSHVTRRTRKESSLQFHWRILSNMLRVAPWSR
LPLTVRWLRQEYHMEFEPQLQPPLHVPLAFGCVRAKKKQQHEDKEQEENQLDQCLLCRGI
VQTSERLSCFHPSCKMVCHLICLAKHFLKSDPAHLLPVEAECPGCHHSVLWGNLIRHKNG
CYGDLEEYASNSSQSHWADELQI
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggttgtggaggtggagagtttttatggggtttatatgttgtactgtaaaaaccccaaa
tttaaggggcgcatttacatcggattcactgtgaaccccgagcggagaatcgtgcagcac
aacgcagggagacacaaaggaggagccaagaggaccagcgggagaggaccttgggagatg
gtgcttatcatccatggctttccatctgatattgctgccctaaggtttgagtgggcatgg
caacacccacacatctctcgcaggctttcccatgtgaccaggcgtacacgtaaggagtcc
agcctgcagtttcattggcgcattctatccaacatgttgcgggtggcgccgtggagtcgt
ctccccctcactgtgcgctggctgaggcaggaataccatatggagtttgagccacagctg
cagccgcctctgcacgtccctcttgctttcggctgtgttcgtgctaagaagaaacaacag
catgaagacaaggagcaagaggagaaccagctggaccagtgtctactatgtagagggatt
gtgcagacttcggagagactgtcttgcttccatccttcctgtaagatggtctgtcatctg
atttgcttggcaaaacatttcttgaagtcagacccggctcaccttctccccgtagaggcc
gagtgtcctggctgccatcactcagtgctgtgggggaacttgattcgacataaaaacggc
tgctatggcgaccttgaagagtatgcttcaaattcttctcagagtcattgggcagatgag
ttgcaaatatga
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