KEGG   Tachysurus fulvidraco (yellow catfish): 113657593
Entry
113657593         CDS       T08119                                 
Symbol
slx1b
Name
(RefSeq) structure-specific endonuclease subunit SLX1
  KO
K15078  structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    113657593 (slx1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113657593 (slx1b)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     113657593 (slx1b)
SSDB
Motif
Pfam: SLX1_C GIY-YIG T5orf172 zf-RING-like zf-HC5HC2H_2 zf-HC5HC2H
Other DBs
NCBI-GeneID: 113657593
NCBI-ProteinID: XP_027025312
LinkDB
Position
1:complement(29865021..29868218)
AA seq 263 aa
MVVEVESFYGVYMLYCKNPKFKGRIYIGFTVNPERRIVQHNAGRHKGGAKRTSGRGPWEM
VLIIHGFPSDIAALRFEWAWQHPHISRRLSHVTRRTRKESSLQFHWRILSNMLRVAPWSR
LPLTVRWLRQEYHMEFEPQLQPPLHVPLAFGCVRAKKKQQHEDKEQEENQLDQCLLCRGI
VQTSERLSCFHPSCKMVCHLICLAKHFLKSDPAHLLPVEAECPGCHHSVLWGNLIRHKNG
CYGDLEEYASNSSQSHWADELQI
NT seq 792 nt   +upstreamnt  +downstreamnt
atggttgtggaggtggagagtttttatggggtttatatgttgtactgtaaaaaccccaaa
tttaaggggcgcatttacatcggattcactgtgaaccccgagcggagaatcgtgcagcac
aacgcagggagacacaaaggaggagccaagaggaccagcgggagaggaccttgggagatg
gtgcttatcatccatggctttccatctgatattgctgccctaaggtttgagtgggcatgg
caacacccacacatctctcgcaggctttcccatgtgaccaggcgtacacgtaaggagtcc
agcctgcagtttcattggcgcattctatccaacatgttgcgggtggcgccgtggagtcgt
ctccccctcactgtgcgctggctgaggcaggaataccatatggagtttgagccacagctg
cagccgcctctgcacgtccctcttgctttcggctgtgttcgtgctaagaagaaacaacag
catgaagacaaggagcaagaggagaaccagctggaccagtgtctactatgtagagggatt
gtgcagacttcggagagactgtcttgcttccatccttcctgtaagatggtctgtcatctg
atttgcttggcaaaacatttcttgaagtcagacccggctcaccttctccccgtagaggcc
gagtgtcctggctgccatcactcagtgctgtgggggaacttgattcgacataaaaacggc
tgctatggcgaccttgaagagtatgcttcaaattcttctcagagtcattgggcagatgag
ttgcaaatatga

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