Tachysurus fulvidraco (yellow catfish): 113661149
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Entry
113661149 CDS
T08119
Symbol
rev3l
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X2
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113661149 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113661149 (rev3l)
Enzymes [BR:
tfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
113661149 (rev3l)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
113661149 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
113661149
NCBI-ProteinID:
XP_027030937
LinkDB
All DBs
Position
9:29106735..29153274
Genome browser
AA seq
2980 aa
AA seq
DB search
MMFSVRIVCADYYLSRPLQLLDVCFSQFRDAEVHRVPVVRIFGATPAGQKTCLHVHGVFP
YIYVPYDGFGQEPERYLRQVAFSIDRAVNVSMGNPSSHTMHVFKVTLVSGMPFYGFHPEE
KPFMKIYLYNPQMVKRVCELLQGGAVMNKCFQPHEAHIPFLLQFFIDFNLYGMNLIHLSA
VRFRRHTPDPGEQCKTPVEDEGTMNSPRLSASVLGGTFARWDENNLPSSLVLEDVARVSV
CELEADAVAADILNRLEMENQIGRNPGLQAIWEDEKQRRRERNENSQIETPQSQDRPCME
PVESERFFMKRIKEKLRENQFDLTQSDIEEDDDDDDFPVLSLHPDDLTSGDPPPASQVEV
HKDMPRDNKRSEAKAAEVAVVDEEAILSLLENSQTFLPMSQKSNTSLILNNSQDQAMVDF
LEGLADHRFQKDVPITAPRQEISGSLSCPYNSDEEEAVPELEKEEADISVMMSQRWDNDL
PDPSAHPLEKEANESLSEEEHELLEEEMDWSGNHLFANLSIPQLDGAADENSDSSLSDKG
SRAHSSLTANDKILGRNNHFQSESVHLEPPTSPQILLEYKHLDHSQSLSLGKEEPDDKNL
PDQSEPLTGFKVNKDITYIPPFKHPIPSNMPLVGADRMGGYSHYTDEIKAGGVNQTDPEC
LSFGTAKHSQSSKKYNSIKNAEKNHISILKNHSISLCYSELKTELEKSVKDSRTSSVLSH
LEAPSLVKDLECLVPQEGKMEQNSEEGDVGELKIRYEDYQENKTERKIVAQQEAHYKFFP
SVILSNCLSRPLKKQVRSKMMDGGCSLDHLEQKRSRMKLNKKRNSTASQKSLTECSQTSQ
NEVATGLTFITPVQPSKEMEEKTVMETSELTKSDAVGQVTVEGSVKKSLPDLPDKITCTE
VSSLPGSKYTLRTKRKMVSYDSEDDHLSPSSFKQTLAHQDSLKDNYFLTSSRKKRKLSKK
EPPVIIKYIIINRFKGQKNMLVKMARVKGDESQVVLTPQKLEHYGKLAPMKDFWPKVPES
TAVRYPVPEPKVKKQPKRKAKVTPQSGKLCHFQRTSVVKGRRTKKVKTSSLTKLPAPRPC
YNDLTDDFCKEYSDVLMDLGYLSERASSPTESTPPRCWSPTDPLLDSESNAGLINPHSDP
CLSLSYKGSSRNRCGSKGRGAKPRKLSGASPKQKAKTPVKPSVSETSVTGETSKKSRRTS
RKPKKDVHLREETGNNKSAPQKTRRSFKKNQAERSERSSVVAGPLNSSQSLYPADDHQRT
QTLSDASSPSSQHPGSCQKSLHFSSDSPALPFNTEPKSESIQTNAGDELVSSVSASVPLC
SRSPQRLAEKTTALPCSVITHSNANSSSLPASEDRAYGGKQTSKDVHYSQPNPKMPPKPR
RRQSKKNVENASVQTRDLTTPSNVLMPAPQKDLTEVKLMPKNGETPAHLEMPSGIAVLKA
LLQKRQGQCSQVDNVLNMASNTKKTSEVAKPRKASSATSRKPRIQRHLVPKESKPRGRKE
KSGRTKDSVRSEPTMSDGSPVFLSDPGFDSSYSIEDSLSPEVPHNYSFDINAVGQADFSS
LYSGNQFVLTDKNLPQKFLSDNKHDPVSSMGLGNGQEKVLDIEENCLRESERPGSPELFN
RSSLMEQEEFSNEFCLSLLDSEKVLRNRNWGISLAKIHGSHFQDFHCEKSDLLLHPDHFL
PLTSVSFADNGVSPTGDLLDGSELFTSTTPSSSPRSIGSVSQIRSSSQKSVGVHILKPLM
SPPSREEILATLLELDLSEASYQEPFCSDPSDLPLRPREIAGHKLILETRLAKDLTEFVG
GLSQEGLQFWKTAFFAMTRPGSSPSCGNDSSSTAKDKKERGSPSPASGQVVILLPCKSAP
SRERVQLWLQAKRRFECLQRDRKRRLDASNVMPIQDKNKSPHHNELGSILSLSQKQDEAV
SALQTVRKTGLTLPLSLSPVETSASSNSPKEVKCAMEAETRCQEEREVNSLKQTPSPDPS
FLPPWQPTSNKPNPNDKKQELGDGLTSPKLGIDPFSPESIKPKQFLSPSTCPIKEQDGEI
SGTSLLHSTPIVCKMRSSGACELADCSPVSDLEPKSRRIQQRRNGNKSALCRVLLTTQLK
NHFAGLNVPKGENSQIEGPSLCNSYGFKVGMQNLQEAKALHEVQHLTVMGLELHARTRRD
LKPDPEFDPICALFYCLSSDTPLPESEKKQISGAVVIDKDCRCSGQGSRSTAPLLVRSGI
ADLQVIYTVDEKELFEEVCKIMRKYDPDILVGYEVQMHSWGYLLQRASALSVDLCQQISR
VPGDAKENRFNEDKDEYGSEVMTEIHIVGRITINLWRIMKTEAALNNYNFENVAFHLLHQ
RFPLYTHRTLSDWFDHNTHLYRWKVVDHYMSRVHGVMQLLKQRDVVGRTSEFARVFGIQF
YHVLTRGSQYRVESMMLRIAKPLNFIAVSPSVSQRAQQRAPQSVPLIMEPESRFYSNSVL
VLDFQSLYPSVVIAYNYCYSTCLGYAHSLGTSDEFRFGCTSLRVPPDLLYQLRNDITISP
NGVAFVKASVRKGLLPRMLEEILHTRLMVKSVMKLYGGDEALLRLLDARQLGLKLIANVT
FGYTAAAFSGRMPSVELGDSIIHKARETLERAIKLVNDTKKWGAKVVYGDTDSMFVLLKG
VTKEQAFKIGSEIAEAVTATNPKPIKLKFEKVYLPCVLQTKKRYVGYMYESVDQKDPVFD
AKGIETVRRDGCPAVAKILERSVKLLFETRDISLVKQYVQRQCVKVLEGRASLQDLTFAK
EYRGSASYRPGACVPALELTRRMMAHDRRWEPRVGERVPYVIVYGSPGVPLIQLVRHPLD
VLQDPALRLNAVYYITKQILPPVARIFSLIGVDVFSWYHTLPRVQKWSCPGGGAVGDESL
RKGTISQYFTTLHCPVCDELTQLGVCERCRAEPQRVAVTLHHNLRMWEQKHSQLLKVCMS
CSADRQAVCVSLDCPVLYKLSQVNRQLHNAPYLRQLLQQI
NT seq
8943 nt
NT seq
+upstream
nt +downstream
nt
atgatgttctctgtgcgcatcgtgtgtgcagattattacctgtccaggcctctgcagctg
ctggatgtgtgtttctctcagttcagagatgcggaggtgcacagagtgcctgtggtgagg
atattcggggccacaccggcaggtcagaagacatgtctgcacgtacacggtgtgttccca
tacatctacgtgccctatgatggatttggacaggagccggagcgttacctgagacaggtg
gccttcagcatcgaccgagcagtcaacgtcagcatggggaacccgtcctcacacaccatg
catgtgttcaaggtcacactcgtctctgggatgccattctatggattccaccctgaagag
aagccatttatgaagatttacctctacaatcctcagatggttaagagagtgtgtgagctg
ctgcagggtggagctgtgatgaataagtgtttccagcctcatgaagctcacatcccgttc
ctgctgcagttctttatcgatttcaacctgtacggaatgaatctcatccacctgtcagcg
gtgcgcttcagacgccacacaccagacccaggtgagcagtgtaagactcctgtagaagat
gaaggaacaatgaacagtcccagactcagtgccagtgtgttgggaggcacgtttgctcgg
tgggatgagaataatttacccagctctttggtgttggaggatgtggcgcgggtgagtgtg
tgtgagctggaggccgacgctgtagcagcagacatcctgaatcgcctggagatggagaat
cagatcggaaggaatcccggtttgcaggctatctgggaggatgagaagcaaagacggaga
gagaggaacgagaactcacagatagaaactcctcagtctcaggatcgtccatgcatggag
ccggtggagagtgagcgcttcttcatgaagaggattaaggagaaattaagagaaaaccag
tttgatttgacacaaagcgacattgaagaagatgatgatgatgatgatttccctgtcctc
tcccttcatcctgatgatctaacttctggtgatccaccacctgcaagccaggtggaggtg
cacaaagatatgcccagagataataaacggtctgaagccaaagctgcagaagtagctgtt
gtggatgaagaggccattttgagcttgttggagaacagtcagaccttcttgcccatgtct
cagaagtccaacacgtcccttatactcaataacagccaggatcaagccatggtggacttt
ctcgagggactcgcagatcatcgatttcaaaaagatgttccaataactgctccccgtcag
gaaatatcaggaagtcttagctgcccctacaacagcgatgaggaagaggcagttcctgag
ctggagaaagaagaagcagatataagcgtgatgatgtcacagagatgggataatgatctc
ccagacccgtcagctcatccgctagagaaagaagcaaatgaaagcttgagtgaagaggag
cacgagttgttggaggaagagatggactggagtggaaaccatctctttgctaatctgtct
attccccagctggatggggctgcagacgagaacagcgattcgtcgttatctgacaaagga
tctcgagctcactcgtcactgactgctaacgataagatattgggcaggaacaatcacttt
cagagtgaaagtgttcacctagagcccccgacctcacctcaaatccttctggagtacaaa
catcttgaccatagtcagtccctatcacttggtaaggaggaaccagatgacaagaacctt
cctgatcaaagtgaaccattaacagggttcaaagtgaataaagacatcacttatatccca
ccattcaaacacccaatcccatcaaatatgcccctggttggtgctgacagaatgggcggt
tactcgcattacacagatgagatcaaagctggaggcgttaaccagacagacccggagtgt
ttaagctttggaaccgcaaagcactcccagagctccaaaaagtataatagcatcaaaaat
gctgagaagaaccacatttccatcttgaagaatcacagcatttctttgtgctattctgag
cttaaaaccgagctggagaaaagtgtaaaagactccagaacctcctctgtgctaagtcat
ctcgaggctccgagcctagtgaaagatcttgagtgtctggtacctcaagagggtaaaatg
gagcagaacagtgaggaaggtgatgtcggggagcttaagataagatatgaagactaccaa
gaaaacaaaacagaaagaaaaatcgtggcccagcaggaggcacactacaaattcttccca
agtgtcattctctcaaactgtctctcaaggcctctgaagaagcaggtcagaagtaagatg
atggatggtggttgtagcttggatcatttggaacaaaaaaggtcaagaatgaagttaaac
aagaagaggaacagtacagcaagtcaaaagagtctgaccgaatgttcacaaacctcccaa
aatgaggtggctacaggtttgaccttcatcacaccagtccagccaagcaaggaaatggag
gagaaaactgtgatggaaacctctgaactcacaaaatctgatgctgttggtcaagttacg
gttgaaggttctgtcaagaaaagtctgcccgatcttcctgacaaaataacttgcactgaa
gtgtctagtttaccaggcagcaagtatacccttcgtaccaagcgtaaaatggtcagttat
gacagtgaagatgatcacttgagtccttcttcttttaaacaaaccttggcacatcaagac
agccttaaagacaactattttcttaccagtagtcgaaagaagaggaagttgtctaaaaaa
gagccaccagtcatcatcaaatacattataatcaacaggtttaaaggccagaaaaacatg
ttggtaaagatggcaagggtcaaaggagatgagtcacaagtggtactgacaccacagaag
cttgagcattatgggaaacttgcccctatgaaagacttctggccgaaggttcccgagtcg
acggcggtcagatatcctgttcctgaaccgaaggtaaagaaacagcccaaacgtaaggcc
aaggtcacacctcagtcagggaaactctgccactttcaaagaacaagtgtcgtaaaagga
cgcaggactaaaaaagtgaaaacgtcgtctttaacaaaactgcctgctcctaggccttgt
tataatgatctcaccgacgacttctgcaaagagtattctgacgtgctgatggatctgggt
tacctctcagagagagcatccagtcctactgagtcaaccccacctcgatgctggtctcca
actgaccctctgttagactccgagtctaatgctgggttgataaaccctcatagtgatcct
tgtcttagcttgtcatataagggatcatccaggaaccgttgtggtagtaaaggcagggga
gctaaaccaagaaagctttctggtgccagcccaaaacaaaaagctaagactcctgtcaag
ccatctgtcagtgaaacgtcagtaactggggaaacatcaaaaaagagccgtcgaacttca
agaaagccaaaaaaagacgttcatcttcgggaagaaactggaaataataaatctgctcct
cagaaaaccaggaggtcttttaagaagaaccaggcagagagatcggaaaggtcttctgtg
gttgcaggacctctgaatagttcacagtctttgtatccagctgatgaccatcaacggaca
caaacactatctgatgcttcgtctccctcctcccagcatccaggttcttgccaaaaaagt
cttcatttcagtagtgattctcctgcactcccgtttaacactgaaccaaaatccgagtcg
atccaaacgaatgctggagacgaactggtcagcagtgtttctgcttcagtaccactatgt
tctcggtctcctcaaaggcttgctgagaagaccactgcattaccatgctcagtcataaca
cacagtaatgccaactccagttcactccctgccagtgaagatcgagcttatggtggaaaa
caaacttctaaagatgttcattactcgcagccaaacccaaagatgccacccaaacccagg
agacgtcaatccaaaaagaatgtagaaaacgcttctgttcaaacccgtgatctcacgaca
ccctcgaatgttttaatgcctgcaccgcaaaaagatcttaccgaagtaaagttaatgcca
aagaacggagagacaccagctcatctggagatgccttctggcatcgcagttttgaaggca
ctgctccagaaaaggcaggggcagtgctctcaggtagataacgtattaaacatggcttct
aacactaaaaaaacgtctgaagttgcaaaacctagaaaggcatcttcagcaacatcaaga
aagcccagaatccagagacatttggtgccaaaggagtcaaagccaagagggagaaaagaa
aagagcggcagaacgaaagactccgttcggtcggaacctacaatgtcggatgggagccct
gtgttcttgtctgatcctggttttgacagctcttactccattgaagatagtttatctcct
gaggttcctcacaattacagttttgacatcaacgctgtcggccaggccgacttttctagc
ctgtattctggaaaccagtttgttttaacggacaagaatttgcctcagaaattcctcagt
gataataaacacgacccggtgtcttctatgggtttgggtaatgggcaggagaaggtccta
gacattgaggagaactgcttacgtgaatcggagaggccaggaagccccgagctcttcaat
agatcctctttgatggagcaagaagagttctcaaatgagttctgtctgtctctgctggac
tctgagaaggtgttgagaaacagaaactggggcatttcattggctaaaatacatggcagc
cactttcaagactttcactgtgagaaaagtgacctgttattacatcctgaccacttctta
cccctgacatctgtctcttttgctgataacggcgtgtcgcctacaggggatctgctggac
ggtagtgagctttttacatctacaactcccagtagttcaccacggtctatcggctctgtg
tcacaaataaggagcagcagtcaaaagagtgtaggagttcatatcctcaagcccctaatg
tcccctcctagtcgtgaggagattctcgctaccctgctggagctggatctttcagaggct
tcctatcaagaacctttttgcagtgacccctctgacctgcctttgagaccgagagagatt
gctggacacaaactaattctggaaacaaggttagcaaaagatctgactgaatttgttggt
ggtttatcacaagaaggtctgcaattctggaaaaccgcattctttgccatgacacgtcca
gggtcttcaccttcttgtggcaatgactcctcaagcacggccaaagacaagaaggaacgg
ggcagtccgtctcctgctagcggtcaggtggtgattttactgccttgcaaaagtgctcca
agccgggaacgtgtacaactgtggttacaagctaagagacgattcgagtgccttcagaga
gatcggaaaaggagactcgacgcgtcaaacgtgatgccaatccaggacaagaataaatca
ccacaccacaatgagttaggaagcattttgtctctgtcccagaagcaggacgaggcagtt
tcagccctgcagaccgtcaggaagacgggattaactttgcctctgagtttatctccagta
gagacaagtgcctctagcaacagtccaaaggaggttaaatgtgccatggaggctgaaacc
agatgccaagaggagagagaagtaaattcccttaaacagaccccatccccagacccttct
tttctgccaccatggcaaccaacgtccaacaaaccgaacccgaacgataagaagcaggaa
ttaggagatggattaacgtcccctaaactaggcatcgatcctttctcaccagaaagcatt
aaaccaaagcagttcctcagtccatcaacatgtcctataaaggagcaggatggggagatt
tccggtacctccctcctccacagcacccccattgtctgcaagatgagaagcagtggagcc
tgtgagcttgcagactgcagtcctgtctcagacctggagcccaaatctcggagaatccag
caaagacgaaacggcaacaaaagtgcattgtgtagagttctgctcactacacaactgaag
aatcattttgcgggtctgaacgtacccaaaggggagaactctcagatcgagggtccgtcg
ctatgcaactcgtacgggttcaaagtcggtatgcagaacctgcaggaagctaaagcgctg
cacgaggtgcagcacctaacagtgatgggtttggaactgcacgctcggacacgccgagat
ttgaaacctgaccccgagttcgaccccatctgtgccttattttactgcctcagttctgac
acgccgcttcccgaatcagagaagaaacagataagcggcgctgtggtcatcgataaagac
tgtcgctgctcaggacaaggctcacggagcacagcgcccctgctggtcagatccggtatt
gcagatctgcaggtcatttatactgttgatgaaaaggagctgtttgaagaagtctgcaaa
ataatgagaaagtatgatccagacattctggttggttatgaggttcagatgcactcttgg
ggttacctgctacagcgagcatcagcactcagtgtggatctgtgccaacaaatttcccga
gtgccaggtgatgcaaaggagaaccgctttaatgaagataaagatgagtacggcagcgag
gtgatgacagagatccacattgtcgggcgtatcaccatcaacctgtggaggatcatgaag
accgaggcagctttgaataactacaactttgagaacgtagcgtttcacctgctgcatcag
cgtttcccactttacacacaccgaactctctcagactggttcgaccacaacacacacctc
tacagatggaaggtggtggaccactacatgagccgtgtacatggtgtgatgcagctcctg
aagcagagagatgttgtgggtcgcactagtgaatttgctcgagtgtttggtatacagttc
taccacgtcctcacacggggctcccagtaccgtgttgagtcgatgatgttgcgcattgct
aagccactgaactttattgctgtgagcccgagtgtgtcccagcgagcccagcagagggcg
ccacagagtgttcctctcatcatggagccagagtctcgtttctacagtaactctgtactg
gtgctggacttccagtctctctatccatctgttgtcatcgcctacaactactgctactcc
acctgccttggctacgcccacagccttggaacgtctgatgagtttaggttcggttgtacg
tctttgcgcgttcctccggatcttctttatcagctccgtaatgacatcaccatctctcca
aatggagttgcctttgtcaaggcatcagtgcgtaaaggcctgctcccccgcatgttggag
gagatcctacacacccgtttaatggtgaagtcagtgatgaagttgtatggtggtgatgaa
gcattgctccgcctcctggatgctcgtcagctcggcctcaagctcattgctaacgtgacc
ttcggctacacggcagcggcgttttctggacgcatgcccagcgtggagctcggagacagc
atcatacacaaagccagagagacgctggagagagccatcaaactcgtcaatgacaccaag
aagtggggggcaaaggtggtgtacggggacacagacagtatgtttgtgttgttaaagggg
gtgactaaagagcaggcgtttaagatcggcagtgagattgctgaagcggtgactgctaca
aaccccaaacccattaaactcaaatttgagaaggtgtacctgccatgtgtattacagact
aagaagcgttatgtaggctacatgtacgagtctgtggatcagaaggatcctgtatttgat
gctaaaggcattgagaccgtacgccgtgatggctgtcctgctgttgccaagatcctggag
cgatcggtgaagctgctgtttgagacgagggacatctctctggtgaagcagtacgtacag
aggcagtgtgtgaaggttctggaaggcagagccagcttgcaggatttaacttttgctaaa
gagtaccgtggcagcgcctcctacaggcccggagcatgtgtacctgcacttgagctcacc
aggaggatgatggcacatgaccgtcgttgggagccgcgggttggcgagcgtgtgccatac
gtcattgtgtacggttctcctggggttcctctgatccagttggtgcgacaccctctggat
gttctgcaggatcctgcactgcgcctcaacgctgtgtactacatcactaaacagatcctc
cctcctgtagcgcgcatcttcagcctgattggggttgatgtgttcagctggtaccacaca
ctgccacgggtacagaagtggtcatgtccaggtggtggcgctgtaggggacgagtctctg
aggaaggggacgatctctcagtacttcaccacgctgcactgcccggtgtgtgacgagctg
actcagctgggtgtgtgtgagcgctgcagggccgaacctcagcgtgtcgccgtcacactg
catcataacctccgaatgtgggagcaaaaacacagccagctcctaaaggtgtgtatgagt
tgcagtgcagacagacaggctgtctgtgtctctctcgactgtcctgtgctgtataaactg
tcccaggtgaacagacagctccacaacgccccctacctgcgacagctactacaacagatc
taa
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integrated database retrieval system
