Tachysurus fulvidraco (yellow catfish): 113661796
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Entry
113661796 CDS
T08119
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113661796 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113661796 (trip13)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
113661796 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_18
TIP49
AAA_25
AAA_14
AAA_24
Viral_helicase1
ATPase_2
NACHT
NPHP3_N
AAA_5
AAA_28
TsaE
ABC_tran
RNA_helicase
RuvB_N
bpMoxR
AAA_33
AAA_17
Cytidylate_kin
KAP_NTPase
AAA_30
DUF815
AAA_7
AAA_11
IstB_IS21
SLFN-g3_helicase
AAA_3
NB-ARC
AAA_19
Rad17
Mg_chelatase
PduV-EutP
NTPase_1
nSTAND1
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
113661796
NCBI-ProteinID:
XP_027032054
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Position
25:4849838..4860107
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AA seq
432 aa
AA seq
DB search
MNGEKMEVGWNHHQHPCEDDITDRAKVHVEVLVKSQSTARRSEVRTHVLALLDRHSLVMG
CFKWTEFDDDFLSKNVESVAVVDVEAQPLNLKSGNLCIHIFSLNDDGPSMLNLEEEEELS
AANHWLLPAAEFHGIWESLVYEEGIKTQLLDYVSTAIFFSDKNVDSNLVAWNRVVLLHGP
PGTGKTSLCKALAQKLSIRLSGRYSYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQELI
DEKEALVFVLIDEVESLTAARNASQAGTEPSDAIRVVNSVLTQLDQIKRHPNVVILTTSN
VTEKIDLAFVDRADIKQYIGLPSTQAIFNIYLTCLEELMKRQIIYPRQQLLNLVELDTLN
YIESEVTQLSLHLQKIAKKSVGLSGRTLRKIPFLAHALYAKTSVITLECFLSAMDKAVAH
QMKEREKLVNCV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggagaaaatggaggttggttggaatcaccatcagcatccctgtgaggacgac
ataactgaccgagccaaagttcacgttgaggttcttgtcaaatcacagagcacagcgaga
cgctctgaagtcaggacgcatgttttggctctgctcgaccgacacagcctcgttatgggc
tgcttcaagtggacggagtttgatgatgacttcctaagtaaaaatgtggaatctgttgct
gtggtggatgtcgaagcacagcctctcaatttaaaatcgggtaatctgtgcattcacatc
ttctctctcaacgacgacggcccaagcatgctcaacctcgaggaagaggaggagctttct
gcagccaatcactggctcttaccagcagccgagtttcacgggatatgggagagcttggtt
tacgaggaaggaatcaaaacgcaactcttggattatgtttcgacagcaatcttcttctct
gacaaaaacgttgacagcaatctggtagcctggaatcgcgtcgtgttgcttcacggacct
ccaggcacaggaaagacatcgctgtgtaaagcgctggcacagaaactctccatcagactc
tcaggaagatattcctatgggcaatttgtagaaatcaacagccacagtttgttctcaaaa
tggttttcagagagcgggaaactggtcacgaagatgtttcagaagattcaagagctgata
gatgagaaagaagcccttgtttttgttcttattgatgaggtggagagtctaacagcagcc
agaaatgcctctcaggcaggaaccgaaccttcagatgccatccgagttgtcaactctgtc
cttacacagctggaccagataaaacgacatccaaacgtggtgatccttactacctcaaac
gtgaccgagaagattgacctggcctttgtggacagagcggatataaagcagtatatcggc
ttgccaagcacccaggccatcttcaacatctacctgacctgtctggaggagctcatgaag
cggcagatcatttacccccggcagcagctgctgaacctcgtggagcttgatacgttaaac
tatatcgagagtgaagtgactcagctcagtcttcaccttcagaaaattgctaagaaaagt
gttggccttagtggacgcactttgaggaaaatcccctttttggctcatgctctttatgca
aagacatccgtgatcacgctcgaatgctttctgagtgccatggacaaggctgtcgctcat
cagatgaaagaacgagagaaactggttaactgtgtatga
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