Takifugu flavidus (sansaifugu): 130513902
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Entry
130513902 CDS
T09160
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfs04121
]
130513902 (rnf6)
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130513902 (rnf6)
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130513902 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF6_N
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-RING-like
zf-P11
Motif
Other DBs
NCBI-GeneID:
130513902
NCBI-ProteinID:
XP_056869161
LinkDB
All DBs
Position
17:complement(5913303..5917737)
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AA seq
715 aa
AA seq
DB search
MDPPGGGDERRRQAERLQREEAYYHFINDLSEEEYRLMRDGNLLGTPGEVTAEELQQRLD
GAKERMSSQPPHEQQPQPANAEEQQGSSGEGEERRAGGRQAPGGTDPGAETSNGDSLLEW
LNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHDQPEPGEHNDPADTAE
LPVPVPASISPAIRTSSSFSSSLPSSTPRPGPYSTARPALRRMQTRRRRSSNTAVPLSPP
VLPTTVTPTAAQRSANVPSLAPTPTLPSSPEEQIASLQQQTSNVELEQSSESMSASIDCP
RVSSQAASQAPADGNETRASRTRSRGRARRATAASSVSSRLSRRSRSPLHRLLVASNNSP
SNSSGNGSTIHTFEPGSGTSSVSLETGVAVAEPAVPTEPVVETAERESESQVTGAGSSAV
RRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARVAENTVTFETESGGFRRTISRSERA
GIRTYVSTIRIPLRRISETGLGEPNSTALRSILRQIMTGFGELSSLMETEADSETVAPSH
TNASGANGNTNPAGRLNPNESHAGQFDTAAVDHERVGLVVGEDHSGHARLGGEVVNTIGG
RATSRDTNNLVENGTLPILRLAHFFLLNDDEDDEHHRGLTKEQIDNLATRTYGQASLEGE
IGRACSVCINEYAQGNKLRRLPCSHEFHIHCIDRWLSENNTCPICRQPILTAHRD
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcctggtgggggagatgaacggaggaggcaggcagagcggcttcagcgagag
gaggcttactatcattttattaatgacctgagtgaagaggagtatcgcttaatgagagat
ggcaacctgcttggcactcctggtgaggtgactgccgaagagctccagcagcgacttgat
ggagcaaaagaacgcatgtcatctcaacctcctcatgagcagcagccacagcctgctaat
gctgaagagcaacaaggtagcagcggtgagggagaagagagaagggctggaggacgacaa
gccccagggggtacagatcctggagcggaaacctctaatggcgactcattgctagagtgg
ttaaacactttcagacgtaccggtaatgccactcgtagtgggcagagcggcaaccagacc
tggcgtgctgtcagccggaccaaccccaacagtggagaatttcggtttagtttagaaatc
aacatcaaccacgatcagccagaaccaggagagcataatgatcctgcggacactgccgag
ctaccagtgcctgtcccagcgtcgatctcccccgccatacgtacctcttcatctttttcc
agctctcttccttcaagcactccaaggccagggccatactccactgcccgtccagccctt
aggagaatgcagacgcggcgcagacgcagcagcaatactgctgttcctctgagtccccct
gtacttcctacaacagtcaccccaacggctgctcagagaagtgccaacgtgccgtcttta
gcacctactccgactcttccaagttctcctgaggagcagatcgccagtctgcaacaacaa
acctccaatgtagagttggagcaaagcagtgagagtatgtctgcttctatagactgtccc
cgtgtgtcatctcaggcagcatctcaggccccagcagatggaaacgaaacgcgtgccagt
aggactcgatcccgtggtcgtgcacggagagctacagctgcgagcagcgtttcatcccgc
ttgtcgagacgaagccgttcacccttgcacagattactcgttgctagtaataattcaccg
tcgaacagcagcggcaatggctctacaatccatacttttgaaccaggcagcggcacgagc
tcggtttccttggaaacaggggtggctgtggcagaacccgcagttcccaccgagccggta
gtagagactgcagaacgtgagagtgaatctcaagtaactggagcaggaagttctgcagta
cgacgacatcctacaatcatgctggatctacaggtgagacgcatccgacctggtgaaaac
cgcgatcgggacagcattgcgagtagaacacgttctcgtgcccgtgtcgctgagaacact
gtcacttttgaaacggagagcggtggatttagacgcaccatttcccgctcagaacgagct
gggatccgcacctatgtaagtactattagaatccccctgaggcgcatcagtgagacaggg
ctgggagagcccaactctacggccctgcgttccatcctacgtcaaattatgactggattc
ggagaactgagctcgctaatggagacggaggctgattctgaaactgttgctcctagccac
acaaatgccagtggcgccaatggcaacaccaacccagccggtcgtctgaatccaaacgag
agccacgccggtcagtttgatacagccgcagtagatcacgaaagggtgggcttggtggtc
ggtgaggaccatagtggacatgccaggctgggaggagaggtagtgaacactataggagga
cgggctaccagcagggacacgaacaacctggtagaaaatggtactctacccatcctgcgg
ctggctcacttcttcctgcttaatgacgatgaggatgacgaacatcaccgaggcctgacg
aaggagcagattgacaatctagcaacgcgtacctacggccaggccagcctggagggcgag
ataggccgggcttgcagcgtgtgcatcaacgagtacgctcaaggcaacaagttgcgtcgt
ctgccgtgctcgcatgaatttcacatccactgtattgaccgttggctctctgaaaacaac
acctgccccatctgtaggcagcccatccttacagcacatcgtgactga
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