KEGG   Takifugu flavidus (sansaifugu): 130521920
Entry
130521920         CDS       T09160                                 
Symbol
tdp1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    130521920 (tdp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tfs03400]
    130521920 (tdp1)
DNA repair and recombination proteins [BR:tfs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     130521920 (tdp1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL MRC1
Other DBs
NCBI-GeneID: 130521920
NCBI-ProteinID: XP_056881781
LinkDB
Position
2:3074738..3079431
AA seq 636 aa
MIKTCIKGHICIRPVQPSLGSTMTKDSHHGKWTISSSDDDDDNERLPLSGTTTLKHHQLA
TSANSSPQPSSSPKLEVKAEPANPYAVGSEARQTATLNQSNPGKYENNSPLSGKRKKEAG
DGSGWALSDSDDEDNVAEKQKRLSNVPKKEPPSSKAKKIKVESERPPSPHGRVYYIDEPE
DFFESSVPCLNDMYRFYLNKVTGLDRKYNTGALHIRDILSPLFGTLKASVQFNYCFDIAW
MVKQYPEEFRDRPVLIVHGDKREAKARLVQQAQGFPHIQFCQAKLDIAFGTHHTKMMLLW
YEEGFRVIVLTSNLIRADWYQKTQGMWMSPLFPRLPEGSSASSGESPTYFKRDLLEYLAS
YRAPELEEWIQRIKEHDLSETSVYLVGSTPGRYVGSDMERWGHLRLRKLLSEHTEAFPGE
ERWPVIGQFSSIGSMGLDKTKWLAGEFQRTMTTMGKSTVRSDPPMQLLYPSVEDVRTSLE
GYPAGGSLPYSIQTAQKQLWLHSFFHRWKADSTGRSHAMPHIKTYMRVSPNFTELAWFFM
TSANLSKAAWGALEKNNTQMMIRSYELGVLFVPSAFKMKTFPVNKSPFLVSSSSFSGFPV
PFDLPPTAYSPKDQPWIWNIPYSQAPDTHGNIWVPS
NT seq 1911 nt   +upstreamnt  +downstreamnt
atgatcaagacctgcataaagggtcatatttgcatcaggccagtgcaaccctcccttgga
tcaaccatgactaaggacagtcatcatggcaagtggaccatctccagcagtgatgatgac
gatgataatgaacgtcttcctctatctgggactacaacgttgaaacatcaccagcttgcc
acatctgcaaacagctccccgcagccttcctccagccccaaactagaagtgaaagcagag
ccagctaacccctatgctgttggatcagaggccagacagacagcaacactgaaccagtct
aatcctgggaaatatgaaaataattcccccttatctggaaaaaggaaaaaggaggcaggt
gatggctccggctgggccctctcagatagtgatgacgaggacaacgtagctgagaagcag
aaaaggctcagcaacgttccaaagaaggaaccaccaagctcgaaagcaaagaaaattaaa
gtggagagcgaacgtcccccgagtccacatggccgggtgtactatatcgatgagccagag
gacttctttgaatccagtgttccatgtttgaatgacatgtacaggttttacctcaacaaa
gtcacaggtctggacaggaagtacaacactggagctttgcacatcagagacattctctct
ccattatttggaactctaaaagcatctgtccagtttaactactgcttcgatattgcctgg
atggttaagcagtatccagaagagttcagagatcgaccggtcctgattgtccatggggat
aagagggaggcgaaggcccgactggtgcagcaggctcagggatttccacatattcagttc
tgccaggctaagctggatattgcttttggaacacatcacacgaagatgatgctgttgtgg
tatgaggagggcttcagagtcattgtcctgacctccaacctcatcagagctgactggtac
cagaagacacaagggatgtggatgagtcctttgtttccacgtttaccagaaggcagcagt
gcaagttcaggtgagtctccaacctactttaagagggaccttctggagtatctggcctcg
taccgtgcgccagagcttgaggagtggatccagcgaatcaaagagcacgacctgtcagag
accagtgtttatttggtgggctcaaccccagggaggtatgtgggttcagacatggagcgc
tggggccacctgaggctcaggaagcttttgtcagaacacacggaggcttttcctggtgag
gaaaggtggcctgtgattggccagttctccagcattggctccatgggtttggataaaacc
aagtggttggcaggggaatttcagcgcaccatgaccaccatgggaaaatccactgttcgt
tcagaccccccaatgcagttgttatatccatcagttgaagatgtgaggactagtttagag
ggttatccagcgggaggctctcttccctacagcatccagacagctcagaaacaactatgg
ctccattctttcttccatcggtggaaggcagattcaacaggaagaagtcacgccatgccg
cacatcaagacttacatgagggtgtcgccaaatttcaccgagctggcctggttctttatg
acaagtgcaaacctgtccaaagctgcatggggtgcgctggagaaaaacaacactcagatg
atgattcgctcgtatgagctgggagtcctgttcgttccgtctgcctttaagatgaagacc
tttcctgtaaacaaaagtccattcctggtctcctcttcatcattctctgggttcccagtg
ccctttgatcttcctccaacagcttattctcctaaagatcagccttggatctggaacata
ccgtacagccaagcccctgacacacacggcaacatctgggttccctcctaa

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