Takifugu flavidus (sansaifugu): 130523787
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Entry
130523787 CDS
T09160
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03013
Nucleocytoplasmic transport
tfs04141
Protein processing in endoplasmic reticulum
tfs04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130523787 (sec13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130523787 (sec13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
130523787 (sec13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130523787 (sec13)
04131 Membrane trafficking [BR:
tfs04131
]
130523787 (sec13)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130523787 (sec13)
Membrane trafficking [BR:
tfs04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
130523787 (sec13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130523787 (sec13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
130523787 (sec13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_EML
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
130523787
NCBI-ProteinID:
XP_056885310
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Position
4:487520..490100
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AA seq
320 aa
AA seq
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MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRTVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMFGNILASCSYDRKVIVWKEENGSWDKMYEYTGHESSVNSVCWGPYDFGLIL
ACGSSDGAISLLTFTGDQQWDVKKINNAHTIGCNAVSWGPAVVPGSLIDQPTGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESMDGQWACIS
DVSKGQGAVSAITDTQQSEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtttccgttatcaacacggtggacacctctcacgaagatatgatccacgatgcccag
atggattattatgggacgcgactcgccacctgctcttctgaccgcactgttaagatcttt
gacgtgaggaacggcggccagattctggtggcagatctgagaggccacgaggggccggtg
tggcaggtggcctgggctcaccccatgtttggcaacattctggcttcctgctcctacgac
cgtaaagtcatcgtctggaaggaggagaacggctcctgggacaagatgtacgagtacact
ggacacgagtcgtcggtcaactctgtctgctggggtccatacgactttggcctgatcctg
gcctgcggcagctctgacggcgccatttctctgctcacatttactggcgatcaacagtgg
gatgtgaagaagatcaacaacgctcacacgatcggctgcaacgcggtgagttggggtcct
gccgtggtcccgggcagcctgatcgatcagccgacgggacagaaaccaaattacgtcaag
cgcttcgtctccggaggctgcgataacctggtcaaactctggaaagaggaagacggtcag
tggaaggaggaccagaagctggaggctcacagtgactgggtgagggacgttggctgggct
ccttctatcggccttcccaccagcaccatcgccagctgctctcaggacggacgcgtcttc
atctggacgtgtgacgacccggcggggaacacgtggacggccaagctgctgcacaagttc
aacgacgtcgtttggcacgtcagctggtccatcacaggaaacatcctggcggtttctggt
ggcgacaacaaggtgactctgtggaaggagtcgatggacggccagtgggcgtgcatcagc
gacgtgagcaaggggcagggcgccgtgtcggccatcacagacacacagcagagcgagcag
tga
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