KEGG   Takifugu flavidus (sansaifugu): 130523787
Entry
130523787         CDS       T09160                                 
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs03013  Nucleocytoplasmic transport
tfs04141  Protein processing in endoplasmic reticulum
tfs04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130523787 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130523787 (sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    130523787 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tfs03019]
    130523787 (sec13)
   04131 Membrane trafficking [BR:tfs04131]
    130523787 (sec13)
Messenger RNA biogenesis [BR:tfs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     130523787 (sec13)
Membrane trafficking [BR:tfs04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    130523787 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    130523787 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    130523787 (sec13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta EIF3I ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_EML Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 130523787
NCBI-ProteinID: XP_056885310
LinkDB
Position
4:487520..490100
AA seq 320 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRTVKIFDVRNGGQILVADLRGHEGPV
WQVAWAHPMFGNILASCSYDRKVIVWKEENGSWDKMYEYTGHESSVNSVCWGPYDFGLIL
ACGSSDGAISLLTFTGDQQWDVKKINNAHTIGCNAVSWGPAVVPGSLIDQPTGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESMDGQWACIS
DVSKGQGAVSAITDTQQSEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttccgttatcaacacggtggacacctctcacgaagatatgatccacgatgcccag
atggattattatgggacgcgactcgccacctgctcttctgaccgcactgttaagatcttt
gacgtgaggaacggcggccagattctggtggcagatctgagaggccacgaggggccggtg
tggcaggtggcctgggctcaccccatgtttggcaacattctggcttcctgctcctacgac
cgtaaagtcatcgtctggaaggaggagaacggctcctgggacaagatgtacgagtacact
ggacacgagtcgtcggtcaactctgtctgctggggtccatacgactttggcctgatcctg
gcctgcggcagctctgacggcgccatttctctgctcacatttactggcgatcaacagtgg
gatgtgaagaagatcaacaacgctcacacgatcggctgcaacgcggtgagttggggtcct
gccgtggtcccgggcagcctgatcgatcagccgacgggacagaaaccaaattacgtcaag
cgcttcgtctccggaggctgcgataacctggtcaaactctggaaagaggaagacggtcag
tggaaggaggaccagaagctggaggctcacagtgactgggtgagggacgttggctgggct
ccttctatcggccttcccaccagcaccatcgccagctgctctcaggacggacgcgtcttc
atctggacgtgtgacgacccggcggggaacacgtggacggccaagctgctgcacaagttc
aacgacgtcgtttggcacgtcagctggtccatcacaggaaacatcctggcggtttctggt
ggcgacaacaaggtgactctgtggaaggagtcgatggacggccagtgggcgtgcatcagc
gacgtgagcaaggggcagggcgccgtgtcggccatcacagacacacagcagagcgagcag
tga

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