Takifugu flavidus (sansaifugu): 130531415
Help
Entry
130531415 CDS
T09160
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03013
Nucleocytoplasmic transport
tfs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130531415 (upf3b)
03015 mRNA surveillance pathway
130531415 (upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130531415 (upf3b)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130531415 (upf3b)
mRNA cycle factors
P-body specific factors
130531415 (upf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
130531415
NCBI-ProteinID:
XP_056899405
LinkDB
All DBs
Position
9:4185407..4188793
Genome browser
AA seq
452 aa
AA seq
DB search
MKEDKENTRPKERKLEIKYDDGEKTEKTKEKKEAMTKIVIRRLPPSLTKEELEEQLQPLP
EVDYLEFFSNDTSLFPHLFARAYINFRNQEDIVLFRDRFDGYVFIDKRGQEYPAVVEFAP
FQKTAKKRNKKRDAKCGTIIEDPEYKKFLEYYNGDEEKLTSSPEILLEELEAKSKELVAK
KSTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRKWREEERRKRKESDKMKKVEK
PLEKDRDQGKEPKIKLLKKPERSEENESENPKEKAKKPEKLTKEDRLAGSGDHKRRQNIE
HKEDRGRKTEEHGRREFRERDTDQDREREKERRQKEKERLKRRDEERQRRRERLDAENSC
RKQEDDVRKERERNVDKKKCENLGDFSEKAMKSAKEERKDEKRDRLRNKDRPAIQLYQPG
ARSRNRTTGAGPESAGRKPDAETEKTSDKADD
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagataaagaaaacacccgaccgaaggagagaaagttggaaataaagtatgat
gatggcgaaaagacagagaagacgaaggaaaagaaagaggccatgacaaagattgtgatc
aggcgattaccaccaagtttgacgaaggaagagctggaggaacagttacagcctctgcca
gaggtggactacttggagtttttctccaacgacaccagccttttccctcacctttttgcg
agagcatacattaacttccgaaaccaagaggacatagttctgttcagagatagatttgat
ggatacgtgttcatcgacaagagaggacaggaatatcctgctgttgtggagtttgcacca
tttcaaaagactgccaagaaaagaaataagaaaagggatgcaaaatgtggaacaattatt
gaagatccagaatataaaaagttcctagaatattacaatggagacgaagaaaaattaaca
tcatctccagaaatactgctggaagagctcgaggcaaaatcaaaggaacttgtagctaaa
aaatctactcctctgctggattttctgaagaacaaacagagaatcagggaagagaagaag
gaagagaggcggcggagggagttggaacgcaaacgtctgcgtgatgaggagcggcgaaag
tggagagaggaggagagaaggaagcgaaaagagtctgacaagatgaagaaagttgagaaa
ccgctggagaaggatagagatcagggaaaagagccaaaaattaagctcctgaagaaaccg
gagagaagtgaagagaatgagtctgagaatccaaaggaaaaggccaagaagccagagaag
ctgacgaaagaggatcgattggcagggagcggcgatcacaaacggcggcagaatattgag
cataaggaggaccgaggaaggaaaactgaagaacatggacgaagggagttcagggagcgt
gacacagatcaggacagagagcgggagaaggagcggcggcagaaagagaaggagcgcctc
aagcgtagggatgaagagcggcagagaaggagagaacggctggacgcagagaactcatgc
aggaagcaagaagatgatgtgagaaaggagagagagcgcaatgtggacaagaagaagtgt
gaaaacctgggagacttctcagaaaaggccatgaagtctgccaaagaggagagaaaggac
gagaaaagagaccggctgcgaaataaggaccgacctgcaatccagttgtaccaaccaggg
gccaggagccgcaatcgaaccacgggggcaggacccgagtctgccggcaggaaaccagac
gcagagaccgagaaaacgtctgacaaagcagacgactga
DBGET
integrated database retrieval system
