Takifugu flavidus (sansaifugu): 130533127
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Entry
130533127 CDS
T09160
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130533127 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfs03036
]
130533127 (trip13)
Chromosome and associated proteins [BR:
tfs03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
130533127 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
nSTAND3
AAA_24
AAA_18
AAA_14
Viral_helicase1
NPHP3_N
AAA_25
TIP49
Cytidylate_kin
AAA_28
AAA_5
TsaE
RNA_helicase
NACHT
bpMoxR
ATPase_2
RuvB_N
IstB_IS21
AAA_30
AAA_33
AAA_7
AAA_11
ABC_tran
SLFN-g3_helicase
ATPase
DUF815
AAA_17
AAA_19
Rad17
Mg_chelatase
NB-ARC
PduV-EutP
nSTAND1
Sigma54_activat
PhoH
DUF6393
AAA_3
NTPase_1
nSTAND6
NRBF2
Motif
Other DBs
NCBI-GeneID:
130533127
NCBI-ProteinID:
XP_056902275
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All DBs
Position
10:3135966..3139879
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AA seq
420 aa
AA seq
DB search
MDGEILEVGNQKPLIHVEVCVKSCSTAAGSDIRTHVLALLKRHSMVFGTYRWTEFDEEFL
QKHVDSVFLADLGRIPLDLGNCSLSVHIFTLNEDGPSLLALEEDEELTAASHWMLPAAEF
NGIWESLVYEGNVKTKLLDYVTTTIFFSDKNVDSNLISWNRVVLLHGPPGTGKTSLCKAL
AQKLSIRLSNRYAYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQQLIDDKDAIVFVLID
EVESLTAARKACQAGTEPSDAIRVVNSVLTQLDQIKRHSNVVILTTSNVTEKIDLAFVDR
ADIKQYIGPPSVNGIYSIYLSCLDELMKCKIIYPREQLFTIFELETMGFAESEVSAHSLI
LRHIAVKSKGLSGRALRKLPFLAHALFVKTMTVTLAQFLEAMNQAVDAQKEEKANLVNCV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgaaatactggaagtggggaaccaaaaacctttaatccacgttgaagtctgt
gtaaaaagctgtagcacggctgcagggtctgacatcaggacacatgttctcgctcttctg
aagcgccacagcatggtgtttggaacttacagatggacagagtttgatgaggagtttcta
cagaaacacgtcgattctgtatttctggctgatcttgggcgaattcctctagacctgggg
aactgctcactttctgttcacatattcaccctgaatgaagatggacccagcttgctcgct
ctggaggaggatgaggagctgacggcagccagccactggatgctgccggcagctgaattt
aatgggatttgggagagtctggtctatgaggggaatgtaaaaacaaagctgttggattac
gttacgacgaccattttcttctctgacaaaaacgtggacagcaacctgatttcctggaac
cgggtggtgctgcttcatggacccccaggcacagggaagacgtcactgtgcaaagcactc
gcgcagaagctgtctatccgactgtcaaaccggtatgcttacggccagtttgtggagatc
aacagccacagcttgttctccaagtggttttcagagagtggtaaactggtgacaaagatg
tttcaaaagatccagcagctgattgacgacaaagacgctattgtttttgttctgatcgat
gaggtggagagtctaacggcagccaggaaggcctgccaggctggaacggaaccgtctgac
gccatccgtgtggtcaactccgtcctcactcagctggatcagatcaaacgacattccaat
gtcgtgatcctaacaacgtccaacgtgacggagaagattgacttggcatttgtggacaga
gctgacatcaagcagtatatcggacccccctctgtgaacggcatatacagcatttacctc
tcctgtctggatgagctcatgaagtgtaagatcatctacccccgcgagcagctcttcacc
atatttgagcttgagacgatgggctttgcagagagcgaggtgtccgcacacagcttgatc
ctgaggcatatcgccgtaaaaagcaaaggtttgagtgggagagccctcaggaagctaccg
tttctggcccatgcgctgtttgtaaagacaatgacggtgacccttgcacagtttctggag
gctatgaaccaagctgttgatgcacaaaaggaagaaaaagcgaacctggtcaactgtgtt
tga
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