Takifugu flavidus (sansaifugu): 130536025
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Entry
130536025 CDS
T09160
Symbol
trim13
Name
(RefSeq) tripartite motif-containing 13 isoform X1
KO
K12003
tripartite motif-containing protein 13 [EC:
2.3.2.27
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfs04131
]
130536025 (trim13)
04121 Ubiquitin system [BR:
tfs04121
]
130536025 (trim13)
Enzymes [BR:
tfs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130536025 (trim13)
Membrane trafficking [BR:
tfs04131
]
Autophagy
ER-phagy
Other ER-phagy associated proteins
130536025 (trim13)
Ubiquitin system [BR:
tfs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130536025 (trim13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-C3HC4_2
TRIM_CC
zf-C3HC4_3
RING_XB3-XBAT31
BLYB
zf-Nse
ATP-synt_E_2
Motif
Other DBs
NCBI-GeneID:
130536025
NCBI-ProteinID:
XP_056907572
LinkDB
All DBs
Position
1:12624149..12626399
Genome browser
AA seq
435 aa
AA seq
DB search
MRYLAFLCAAEMVNSSPRKGEVCTATSAMIALRCASQQLDTMEQLEEELTCPICCGLFED
PRVLLCSHSFCKKCLEGLLEGSRGSTFRTPFKCPTCRKEAPHNGANSLQINYSLRGIVEK
YSKIKVLPKMSECKHHCGQPLNIFCATDLKLICGFCATTDDHRGHKFCSMEEAYDREKEA
FDELCQRVENWQSADILTHLDTLQTSKKKALQSVTSDAEKVTEYFDKLINSLECKKNEIL
SDLETLKLVVLQAYDPEITKLSAVMEEHRRALGIAESFRGITEPLFFLQQMQEFREKVEL
LKKALLPSRKSISVRPLVRNFDVKKWDSLRLREVDKISVPHESGSYRTEGSRASARTWMR
AFIAMLLITLPFLLPLTAGVPPHVEPVVAALSAHLGHAGAYLRHINDACASLIGAGEASV
AALVDATVRFIGGLF
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcggtacttagcttttctgtgcgctgctgaaatggttaactcttcacccaggaagggc
gaagtctgcacagcaacaagcgccatgattgcgttgcgctgtgcgtctcaacagctggac
accatggagcagttagaagaggagctgacgtgcccgatatgctgcggtctctttgaggat
ccgcgggttttactgtgctcgcacagcttctgcaagaaatgcttggaaggactcctggaa
gggagccgcggatccactttcagaacacctttcaaatgccctacatgccgcaaagaggcg
ccgcacaacggtgccaacagcctgcagatcaactattctctgcgcggaatagtggaaaag
tacagcaaaataaaggttctgcctaaaatgtctgagtgcaaacaccactgcggccagccg
ctgaatatcttttgcgccacggacttaaaactcatttgtgggttctgcgcgacaacagat
gaccacagaggacataaattctgctcgatggaggaggcatatgaccgagagaaggaggcg
tttgacgagctgtgtcaaagagtggagaactggcagagcgcagatatcctgacccacctg
gatacactacaaaccagtaagaaaaaggcgctccagtcggtgaccagtgacgcggagaag
gtgacagagtatttcgacaaactcatcaattccctcgagtgcaaaaagaacgaaattctc
tccgacttagaaaccctgaagctggtggtgttgcaagcgtatgacccggagatcaccaag
ctcagcgcagtgatggaggagcacagacgcgcgctcggcatcgccgagtccttcaggggc
atcacggagccgctcttctttctgcagcagatgcaggagtttcgagagaaggtggaactg
ctgaagaaggccctgctgccctcccggaaaagcataagcgtgcgtccgctggtgcgtaat
ttcgacgttaaaaagtgggattcgctaaggctccgagaggtggacaagatttcagtcccg
cacgagagtggctcctacagaacggagggctcccgggcgtccgcgcgcacgtggatgcgc
gctttcatagcgatgctgctgataacactgccgttcttgctgcccctcacagccggcgtg
cctccgcacgttgagccggtcgtcgctgcgctgtcagcgcaccttggccacgccggcgcg
tatctgcgacacatcaacgacgcgtgcgcgtcactgattggtgcaggtgaggcgagcgtc
gcggccctggtcgacgctaccgtcagatttattggcggattgttttaa
DBGET
integrated database retrieval system
