Takifugu flavidus (sansaifugu): 130537029
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Entry
130537029 CDS
T09160
Symbol
irf1b
Name
(RefSeq) interferon regulatory factor 1b
KO
K09444
interferon regulatory factor 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
130537029 (irf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfs03000
]
130537029 (irf1b)
Transcription factors [BR:
tfs03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
130537029 (irf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
130537029
NCBI-ProteinID:
XP_056909364
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All DBs
Position
14:12175790..12178766
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AA seq
309 aa
AA seq
DB search
MNGSHKESQQANMPISRLRMRPWLERMINSDTIEGLKWVDQAKTMFSIPWKHAARHGWEI
EKDANLFKMWAIHTGKYVEGQANDPKTWKANFRCAMNSLPDITEVKTMSVNKGHQAVRVF
KMLPAVSKCKDKRRKVKEVRKRKRVVLKTEEDTEDSSDAQSSTDELTTQDLSPQDNVVDS
TVKTEQPELRFDPQEEVPDFSLSVEVTDFNLTNFCQRFEVSPEHSPDHETADIIELCKEL
ERDSWLTNSSYGSSSSGFLTNEACTSPGSQWSESSSGEDLEEVPQYTVLGAEFSSDLWTC
FSSQLHHML
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaacggatcacacaaggaaagccagcaagcaaacatgcccatatcgaggttgaggatg
aggccgtggctggagaggatgatcaactcggacaccatcgagggtctgaaatgggtcgac
caggcgaaaacaatgttctccatcccatggaagcatgcagccaggcacggatgggagatc
gaaaaagatgccaacctgtttaagatgtgggccatccacacagggaaatacgtggagggc
caagctaatgaccccaagacgtggaaagccaacttccgctgtgctatgaactcgctgccc
gacatcacagaggtgaaaaccatgagcgttaacaaaggccaccaagccgtgcgcgttttc
aagatgctgcctgcggtctcaaaatgtaaagataagcgacgcaaggtcaaggaggtgcgc
aagaggaagagagttgtcctcaagactgaggaagacacggaggacagcagcgacgctcag
tcctccacagatgagttgacaacacaggacctgtcaccccaggacaacgtagtcgacagc
acagtgaaaacagagcagccagagctcagattcgacccccaggaggaagtccctgacttt
tccttgtccgttgaagtcaccgacttcaatctgaccaacttctgccaaagatttgaagtt
tcgccagagcacagtccagaccatgagaccgccgacatcattgagctatgtaaggagttg
gagcgagactcgtggctgacaaacagttcatacggcagcagcagcagcgggttcctgacc
aatgaagcgtgcacgagcccagggagccagtggagtgagtcttcttcaggcgaagaccta
gaggaggtgccgcagtacaccgttttgggggcagagttctccagcgacttgtggacctgt
ttcagctcacagttgcaccacatgctctga
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