Takifugu flavidus (sansaifugu): 130537976
Help
Entry
130537976 CDS
T09160
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs03013
Nucleocytoplasmic transport
tfs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130537976 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
130537976 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfs03019
]
130537976 (thoc2)
03041 Spliceosome [BR:
tfs03041
]
130537976 (thoc2)
Messenger RNA biogenesis [BR:
tfs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
130537976 (thoc2)
Spliceosome [BR:
tfs03041
]
Complex C
Other components
EJC/TREX
130537976 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
130537976 (thoc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
130537976
NCBI-ProteinID:
XP_056911144
LinkDB
All DBs
Position
14:complement(9041550..9058506)
Genome browser
AA seq
1557 aa
AA seq
DB search
MATLIIPGEWIKNWEKSGKSEFVQLCKDLTEKTQHGNEIRDIQTALYELCWQVVQGNLKL
DLATSVLGDMMELRDDMSSILADVFCILDIETSALEEKNRRDHYTQLVGACLVCVPEAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGSITSHLVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLMPPDVTIVEEHKRDISE
AKQLDRKLVKLVLPTDKNEEKDKEDDKNEKLPDNQKLGLLEALLRIGDWHHAQSIMDQMP
SFYTTSHKAIALALCQLVHLTVEPLYRRVGVSKGAKGRPLHPLKSKRAPRPTECFEDLRR
DTFSMLGYLGPHLSNDPILFAKIVRLGKAFMKEYQNESRPDARDKMDTLLSCFLSIADQV
LLPSLSLMESNACMSEELWGLFKLFPYQHRYRLYGQWKNETYLSHPLLVKVKAQTVERAK
YIMKRLTKENVRQSGRQVGKLSHSNPTILFDYMLSQIQWYDNLIGPVVDSLKYLTSLSYD
VFAYCIIEALANPEKEKMKHDDTAISSWLQSLASLCGAVFRKYSIELAGLLQYVTNQLKT
GKSFDLLILKEVVQKMAGIEITNEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLK
DVLLDHKLALPLCLLMAQHRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLASNLST
EDYIKLVPSIDVLCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNKQQQKLQKYV
AACEQVMMPVHESVVSLHPPRVWDDLRPQFYATFWSLTMYDLAVPHVAYEREINKLKTQI
KEIEENTEMPMNKKKKEKERCTALQEKLQEEEKKQMEHVQRVLYRLKLEKDNWLLTKSTK
NETITKFLQLCLFPRCIFSAIDAVYCAHFVELVHQQKTPNFCTLLCYDRVFSAIIYTVAS
CTENESHRYGRFLCCMLETVTRWHSDRAIYEKECVSYPGFLTVFRATRLDGGNKADQLDY
ENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPFYPKVLNLGQALECRVHK
ICLKEKDKRPDLYVLAMGYSGRLKSQKVHMVPENEFHHKEQPARNATPANQQNGPGSTGK
PASSTSKTEEGTSEDNERVKHKSDSATKLMNKANSAAAKVTTSNGNGALNSTKAIKERDD
KERSGKEKKEKKEKTQGSTPENKVDRREKQRDERAAKEERVVREGKEKTPKADREKAKAE
EKSSKDDKVKAISGESAELSRERDVLKEPKSKEKGDRSAVTGTLKSPVPRAESAESERDH
KRRKLDSHSSPSHSSSVKDNSNEPKEAVSKQHITYNSVTRSKSREKETEKKDTDGMQVRS
KEKKEEKDRKDRKRDYSVNDRETSQEPKRKKDENGTNSFKNSASPPSESPLSAEKEKGKR
SKSSSKEKAESVKPERTSSGGKKESRHEKDKSEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcatccctggagaatggatcaaaaactgggaaaaatccggaaaaagc
gagtttgtgcaactctgcaaagatcttacagagaaaacgcagcatggaaatgaaattaga
gatatacagacagccttgtatgagctctgctggcaggttgtacagggaaacctcaagttg
gatcttgccaccagcgtgcttggagacatgatggagcttcgagatgacatgtcatctatt
ttagcagatgtgttctgtattctcgatatagagacgagcgcactggaagaaaaaaacaga
cgtgaccactacacacagctggtgggagcgtgtttggtgtgtgttccagaggccatcctg
aaagaacgactagatccagaaacgctagaatctcttggactaattaagcaagcccaccag
ttcaatcagaaaatcgtcaaaatcaaaaccaaattgttttacaagcagcagaagtttaac
ttgttacgggaggagaacgagggctacgccaagctgatcactgagctcggccaagatctg
tcgggcagcatcaccagccacctggttctggagagcatcaaatctctcatagggtgtttc
aacttggacccaaaccgtgtgttggacataatcctggaggtttatgagagccgatctgat
caggacgagttctttctgtctctgattaaatcctacatgtgcgaacctctcacactttgc
cacatactgggcttcaaattcaagttctaccaggagcccaatgaggaaaccccaaagtcc
ctctaccacattgctgctgctcttcttcatcataacctaatagagttagaagatctttat
gtgcatctgatgccgccagatgtcactattgtagaagagcacaaacgagacatctcagag
gcgaagcagctcgatcgcaagctggttaagctggtgttgcccactgacaagaatgaagaa
aaggacaaggaggatgataaaaacgagaagctgcctgataaccagaagctcggtctgtta
gaagctctgctcagaatcggagattggcatcatgcccaaagtattatggaccagatgcca
tctttctacacaacttctcacaaggccattgctctggcgctctgccagctcgtgcacctg
actgtggaacctctttacagaagggttggtgtgtcgaagggggcgaagggacgcccattg
catcctctcaagagcaaacgagctccaagacctacagagtgtttcgaggacctccgcagg
gacacattcagcatgctgggctacctgggcccccatctctccaacgatccgattcttttt
gccaagattgtgcgtctgggcaaggccttcatgaaagagtaccagaatgaaagcagaccc
gatgccagagacaaaatggatacactgttgagttgtttcctgagcattgcagaccaggtg
ctgcttccttctctgtcactaatggagtcaaatgcttgcatgtctgaggagctgtggggt
cttttcaagctgtttccataccagcacaggtaccggttatatggacagtggaagaatgag
acctatctcagccatccgctcttggttaaagtcaaagctcagactgtggaaagagccaaa
tatatcatgaagcgattgaccaaagagaatgtgagacaatctggaaggcaggttggcaag
ctgagccatagcaatcccaccatcctcttcgactatatgctgtctcagatccagtggtac
gacaacctcatcggtccagtggtggactccttgaaatacctcacatctctcagctatgac
gtctttgcctattgcatcatcgaggctctagctaatccagagaaagagaagatgaagcac
gacgacacagctatttcctcatggcttcagagcctggcgagcctgtgtggagctgttttc
aggaagtattctattgagctggccggtcttcttcagtatgtgaccaatcagctaaagaca
gggaagagttttgacctgttgatcctgaaagaggtggtacagaaaatggctggcattgaa
ataacaaacgagatgacttcagagcagttggaggccatgacgggaggcgagcagctcaaa
gcagagggtgggtactttggtcaaatcaggaacaccaagaagtcttcacagcgtctaaag
gatgtgctgctggatcataaattggctttgccgctgtgtctgctcatggcccagcaccga
aacggggtagtattcctagaaggtggagagaaacacctgaaacttgttggccacctttat
gaccagtgtcatgacacattggtgcaatttggtggctttctagcctccaatctaagcaca
gaggactacatcaagctggttccctcaattgacgttctttgtaatcagttccacactcca
catgatgctgccttcttcctgtccaggccgatgtatgcgcatcagattttgtcaaagtac
gatgagttgaagaaagcagagaaaggcaacaagcagcagcagaaacttcaaaagtacgta
gctgcctgcgagcaggtgatgatgcccgtgcacgagtccgtggtgtccctccatccaccc
agagtctgggacgacctccgccctcagttctacgccaccttctggtccctcaccatgtac
gacctggcagttccacatgtggcctacgaacgggagattaacaagctcaagacccagatc
aaggagatcgaggagaacacggagatgcctatgaataagaaaaagaaggagaaggagcgc
tgcactgcccttcaggaaaagttgcaggaggaggagaagaagcagatggagcacgtccag
agggttttgtaccgccttaaactggagaaggacaactggttgttgaccaagtctacaaag
aacgagacgattacaaagttcttgcagctttgtctcttccctcgctgcatcttctctgct
atcgacgcggtgtactgtgcccactttgttgagctggtccaccagcagaaaacacctaac
ttctgtacgctcctgtgctatgacagggtgttctctgctattatttacactgtggcgagc
tgtacggagaatgagtctcaccgctacggccgtttcctctgttgcatgctggagactgtg
actcgctggcacagcgatcgcgcaatttacgagaaggagtgtgtcagttaccctggtttc
ctgaccgtcttcagagccacacgtttagatggagggaacaaagccgatcagctagattac
gagaacttccggcatgtggtgcacaagtggcattacatgctaacgaaagcttcggttcac
tgcttggagactggagattacacccacatccgcaacatcctcatcgtgcttacaaagatt
ctgcccttctaccccaaggttctgaacctgggccaagcactggagtgtcgcgttcacaag
atctgccttaaggagaaggacaagaggccagacctctatgtcttagcaatgggttattca
ggtcgattgaaaagccagaaggtgcacatggtccccgagaacgagtttcaccacaaggag
cagccagccagaaacgccacccctgccaatcaacagaacggccccgggagcacaggcaag
cccgcctccagcaccagcaaaacagaggaggggacgtcggaggataacgaaagggtcaaa
cataaatctgattcagccacaaagcttatgaataaagccaacagtgcagcggccaaagtg
accaccagcaatgggaatggtgctctcaatagcaccaaagccatcaaagaacgagacgac
aaagagcggagcgggaaggagaaaaaagagaaaaaggaaaagacgcaaggcagcactccc
gagaacaaggtggaccgtagggagaagcagagagatgagagagcagccaaggaggagcgg
gtggtgcgcgagggtaaggagaagactccaaaggcagacagggagaaagcaaaggccgaa
gagaagagcagcaaagacgacaaggtcaaagccatcagcggggagtctgcagagctgtcc
agagagcgcgatgtcctcaaggagcccaagagcaaggagaaaggagaccgcagtgctgta
accggaactctcaagtcgccagttcccagagcagaatcagccgaatctgagagggatcac
aaaagacgaaagctcgacagtcactcttctccgtcccactcctcatctgttaaggacaat
agcaacgaacccaaggaggccgtgtccaagcaacacatcacctacaactcggtaacccgg
tcgaagagcagagagaaggagacggagaagaaagacactgatggcatgcaagtccgatcc
aaagagaagaaggaggagaaggatcgtaaagacaggaagagagactattctgtcaatgac
cgcgagacgagccaagaacccaaacgcaaaaaggacgaaaatggaaccaattctttcaag
aacagcgcgagccccccctccgagtcgccgctgtcagccgagaaagagaaaggcaagagg
tccaaatcatccagcaaagagaaggccgagtcggtgaaacctgagcgcacctcctccggg
ggcaaaaaggagtccaggcacgagaaagacaaatctgaaaagaaagaaaagagagacagc
accggaggaaaggaagagaaaaagcatcataaatcttctgacaagcacagataa
DBGET
integrated database retrieval system
