Thermobifida fusca: Tfu_0006
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Entry
Tfu_0006 CDS
T00265
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tfu
Thermobifida fusca
Brite
KEGG Orthology (KO) [BR:
tfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfu03032
]
Tfu_0006
03400 DNA repair and recombination proteins [BR:
tfu03400
]
Tfu_0006
Enzymes [BR:
tfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Tfu_0006
DNA replication proteins [BR:
tfu03032
]
Prokaryotic type
DNA Topoisomerases
Tfu_0006
DNA repair and recombination proteins [BR:
tfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Tfu_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AAZ54046
UniProt:
Q47U18
LinkDB
All DBs
Position
6950..8935
Genome browser
AA seq
661 aa
AA seq
DB search
MSCGWSASPGRRVFPTLAYDARSITVLEGLEAVRKRPGMYIGSTGERGLHHLVQEVVDNS
VDEALAGYATAIEVTLLADGGVRVTDNGRGIPVDPHPVEKKPAVELVLTTLHAGGKFDSK
SYAVSGGLHGVGVSVVNALSTRLEVEVRRDGYLWTQSYEMTKPVTELIRREPTDETGTQI
TFWPDGSIFETTTFNFETLSRRLQEMAFLNKGLSITIRDERPEFVGDSPVTQTYYYEGGL
SDFVRHLNATKEPVHSSIIAFEEAGDGIAVEIAMQWNQSYTSSVHTFANTINTAEGGTHE
EGFRAALTSIVNRYARDQKLLRDKDENLTGDDIREGLTAIVSVKLADPQFEGQTKTKLGN
TEAKSFVQKVCHEYLRDWLDRNPGEAKDIVTKATQAARARIAARQARELTRRKTLLESTS
LPGKLADCQSTDPERCEVYIVEGDSAGGSAKGGRDPYYQAILPIRGKILNVEKARIDRIL
KNNEVQAIITALGTGIHDDFDITKLRYHKIILMADADVDGQHIRTLLLTLLFRFMKPLIE
AGHVYLAQPPLYKIKWDPRGTDVDYAYSDRERDEKIAAGIAAGKKDPRPRDLVQRFKGLG
EMNPSELWETTMDPERRVLLQVTLDDAAQADEMFSVLMGEDVESRRAFIQRNARDVRFLD
I
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatgcggatggtcggcgtccccgggcaggagggtgtttccaactttggcctacgac
gcgcgttcaatcacggttctggaaggcctcgaagcggtacgcaaacgccccggtatgtac
atcggatccacgggcgagcgcggactgcaccaccttgtccaagaggttgtggacaactct
gtggacgaggcgctcgccggatacgcgaccgctatcgaggtcacattgctcgctgacggc
ggggtccgggtcaccgacaacggacggggtatcccggtcgacccgcacccagtagaaaag
aagcccgcagtagagcttgtcctcaccaccctgcacgcgggtggcaaattcgacagcaag
tcctacgcggtctccggcggcctgcacggcgtcggcgtctccgtcgtcaacgccttgtcc
acccggctcgaagtcgaagtccgccgggacggctacctgtggacccagagctacgagatg
accaaaccggtcaccgagctcatcaggcgggagcccaccgacgagaccggcacccagatc
acgttctggccggacggctccatcttcgaaaccaccaccttcaacttcgagacgctctcc
cggcggctccaggagatggcgttcctcaacaagggactgtccatcaccatccgagacgag
cgtcccgaattcgtcggcgactccccggtcacccagacctactactacgaaggcgggctg
tcggacttcgtccgccacctcaacgccaccaaggagcccgtccactcctccatcatcgcg
ttcgaagaagccggcgacgggatcgccgtcgagatcgcgatgcagtggaaccagtcctac
acctcctcggtgcacaccttcgccaacaccatcaacacggctgaaggcggcacccacgaa
gagggcttccgcgccgcactcacctccatcgtcaaccggtacgcccgcgaccagaaactg
ctgcgggacaaggacgagaacctcaccggcgacgacatccgggaaggcctcaccgccatc
gtctcggtgaaactcgccgacccccagttcgaaggccagaccaaaaccaaactcggcaac
accgaagccaagtccttcgtccaaaaggtctgccacgaatacctgcgggactggctcgac
cgcaacccgggagaagccaaagacatcgtcaccaaggcgacccaggccgcccgcgcccgg
atcgccgcccgccaagcccgggaactcacccggcgcaagaccctgctggagtccacctca
ctgcccggcaagctcgcagactgccagtccaccgacccggaacgctgcgaggtctacatc
gtcgagggagactccgccggcggctccgccaaaggcgggcgtgacccctactaccaggcg
atcctccccatccgcggcaagatcctcaacgtcgagaaagcccgcatcgaccggatcctc
aaaaacaacgaggtccaggcgatcatcaccgcgctgggcacggggatccacgacgacttc
gacatcaccaagctgcggtaccacaagatcatcctcatggccgacgccgacgtcgacggc
cagcacatccgcacgctgctgctcaccctgctgttccgcttcatgaaaccgctcatcgaa
gccggacacgtctacctcgcgcagcccccgctctacaagatcaagtgggacccccgcgga
accgacgtcgactacgcctactccgaccgcgaacgcgacgagaagatcgccgccggtatc
gcagcgggcaagaaggacccccggccccgcgacctcgtccagcgcttcaaaggcctggga
gagatgaaccccagcgaactgtgggaaaccaccatggaccccgaacggcgggtgctgctg
caagtgacgctggacgacgcagcccaggcagacgaaatgttcagcgtgctcatgggggaa
gacgtcgaatcccgacgcgccttcatccagcgcaacgcccgggacgtccgtttcctggac
atctag
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