KEGG   Thermobifida fusca: Tfu_2654
Entry
Tfu_2654          CDS       T00265                                 
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
tfu  Thermobifida fusca
Pathway
tfu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tfu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Tfu_2654
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tfu03021]
    Tfu_2654
   03400 DNA repair and recombination proteins [BR:tfu03400]
    Tfu_2654
Enzymes [BR:tfu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Tfu_2654
Transcription machinery [BR:tfu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Tfu_2654
DNA repair and recombination proteins [BR:tfu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Tfu_2654
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 Peptidase_M23 Biotin_lipoyl_2
Other DBs
NCBI-ProteinID: AAZ56687
UniProt: Q47LI5
LinkDB
Position
complement(3120711..3124178)
AA seq 1155 aa
MAASRIASANALGPNRVSFARIKEPLEVPNLLALQTESFDWLLGNERWRARVEAARKAGR
KDIPEQSGLEEIFEEISPIEDFSGTMSLSFRDHRFEPPKYSEEECKDKDMTYSAPMFVTA
EFINNDTGEIKSQTVFMGDFPLMTAKGTFIINGTERVVVSQLVRSPGVYFDSQMDKSSDK
ELYGCKIIPSRGAWLEFEIDKRDFVGVRIDRKRKQAVTILLKALGWTTDQILERFGEYES
IRATLEKDPTAGTDDALLDIYRKLRPGEPPTKEAAQALLENLYFNPKRYDLAKVGRYKIN
KKLGLEIDITQGTLTEEDIVATVDYLVRLHAGEKELVRPHGTFPIEVDDIDHFGNRRLRT
VGELIQNQVRLGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIREFFGTSQLSQFM
DQTNPLAGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNIGLIGSL
AAYARVNSFGFIETPYRKVVDGRITDEVVYLTADEEDRYVIAQANTPVNPDGTFAESQVL
ARRKGGEFESVAAEEVHYMDISPRQMVSVATAMIPFLEHDDANRALMGSNMQRQAVPLLR
AEAPLVGTGMEYRAATDAGDVILAEKSGVVEDVTADYITVLADDGTRKTYRVHKFRRTNQ
GTCFNQRPIVEEGQRVEEGQVLADGPSTEAGEMALGKNLLVAYMSWEGHNYEDAIVLSQR
LVEEDILSSIHIEEHEVDARETKLGPEEITREIPNVSEEVLADLDERGIIRIGAEVVDGD
ILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGVRVFSREEGDE
LPPGVNELVRVYVAQKRKITDGDKLAGRHGNKGVIAKILPKEDMPFLEDGTPVDIVLNPL
GVPGRMNIGQIMEMHLGWLAKHGWKVEGDDAEWKRRLRDIGAHEAPPNSKVATPVFDGAR
EDEISGLLSCVLPDQDGDILVNKFGKAKLYDGRTGEPFKEPVAVGYAYFLKLHHLVDDKI
HARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDINGRVK
VYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSRDGMSIEMRDSEEDVFRAAEEL
GIDLGRREPSSVEEV
NT seq 3468 nt   +upstreamnt  +downstreamnt
ttggcagcctcgcgcatcgcctccgctaacgcccttggtccgaaccgcgtttctttcgct
cgcatcaaggaaccacttgaggtcccgaacctccttgccctgcagaccgagtccttcgac
tggctgctcggcaacgagaggtggcgtgcccgagtcgaagcggcccgcaaagccggccgt
aaggacattccggagcagtccggcctggaagagatcttcgaagagatcagtccgatcgag
gacttctcgggcacgatgtcgctgtcgttccgcgaccatcggttcgagcctcccaagtac
tccgaagaggagtgcaaggacaaggacatgacctactccgccccgatgttcgtgacggcg
gagttcatcaacaacgacacgggtgagatcaagagccagacggtgttcatgggcgacttc
ccgctcatgaccgccaagggcacgttcatcatcaacggcaccgagcgtgtcgtcgtctcc
cagcttgtccgctcgcctggcgtgtacttcgacagccagatggacaagtcctccgacaag
gagctctacgggtgcaagatcatcccgtcccgtggagcctggctggaattcgagatcgac
aagcgcgacttcgtcggtgtccgtatcgaccgcaagcgcaagcaggctgtcaccatcctg
ctcaaggcgctgggctggaccaccgaccagatcctggaacgcttcggcgagtacgagtcc
atccgcgccaccctggagaaggaccccactgcggggaccgacgacgcgctgctggacatc
taccgcaagctccgcccgggcgagcctcccacgaaggaggccgcgcaggctctgctggaa
aacctgtacttcaaccccaagcgctacgacctcgccaaggtcggccgctacaagatcaac
aagaagctggggttggagatcgacatcacccaggggacgctcaccgaagaggacatcgtc
gccaccgtcgactacctcgtccggctgcacgccggggagaaggagctggtgcgtccgcac
ggcaccttcccgatcgaggtcgacgacatcgaccacttcggtaaccgccggctgcgcacc
gtcggtgagctcatccagaaccaggtccgcctggggctggcccgcatggaacgggtcgtc
cgggagcgcatgaccacccaggacgtcgaggcgataacgccgcagacgctgatcaacatc
cgtccggtcgtcgcctccatccgggagttcttcggcaccagccagctctcccagttcatg
gaccagaccaacccgctggccggcctgacccacaagcgccgcctctccgcgctgggaccg
ggcggtctgtcccgtgagcgggcgggcttcgaggtccgcgacgtccacccgtcgcactac
ggccgcatgtgcccgatcgagacaccggaaggcccgaacatcggcctcatcggctcgctt
gcggcctacgcccgggtcaactccttcgggttcatcgagaccccctaccgcaaggtggtc
gacggccggatcaccgacgaggtggtctacctcaccgcggacgaagaggaccggtacgtc
atcgcccaggcgaacaccccggtcaaccccgacgggaccttcgcggagtcccaggtgctg
gcacgccgcaagggcggggagttcgagtccgtcgccgcggaagaagtccactacatggac
atctccccgcggcagatggtgtcggtcgccaccgccatgatcccgttcctggagcacgac
gacgccaaccgggcgctcatgggctccaacatgcagcgtcaggcggtgccactgctgcgt
gccgaggccccgctcgtgggtaccggtatggagtaccgcgcggccaccgacgccggcgac
gtcatcctggcggagaagtccggtgtcgtcgaggacgtcaccgccgactacatcaccgtc
ctggccgacgacggcacccgcaagacctaccgggtccacaagttccgccgcaccaaccag
ggcacctgcttcaaccagcgccccatcgtcgaagaaggccagcgggtcgaggaaggccag
gtgctcgccgacggaccgtccaccgaggccggtgagatggcgctcggcaagaacctcctc
gtggcgtacatgtcctgggagggccacaactacgaggacgccatcgtgctgtcccagcgc
ctggtcgaagaggacatcctctcctcgatccacatcgaggaacacgaggtcgacgcgcgc
gagaccaagctgggccccgaggagatcacccgcgagatccccaacgtcagcgaggaagtc
ctcgccgacctcgacgaacgcggcatcatccgcatcggtgccgaggtcgtcgacggtgac
atcctcgtcggtaaggtcacgcccaagggtgagaccgagctgaccccggaggagcgcctg
ctccgcgcgatcttcggggagaaggcccgcgaggtccgcgacacctccttgaaggtgccg
cacggtgagtccggcaaggtcatcggtgtgcgcgtcttcagccgcgaggaaggcgacgag
cttcctccgggcgtgaacgaactggtccgcgtctacgtggcccagaagcgcaagatcacc
gatggcgacaagctcgccggacggcacggcaacaagggtgtcatcgccaagatcctcccc
aaggaagacatgcccttcctggaggacggcacccccgtggacatcgtgctcaacccgctg
ggtgtgcctggccggatgaacatcggccagatcatggaaatgcacctcgggtggctcgcg
aaacacgggtggaaagtcgaaggcgacgacgccgaatggaagcgccggctgcgtgacatc
ggggcacacgaggcaccgcccaactccaaggtcgcgacgcccgtcttcgacggtgcccgg
gaagacgagatcagcggtctgctgagctgcgtcctgcccgaccaggacggcgacatcctg
gtcaacaagttcggcaaggccaagctgtacgacggacgcaccggcgaaccgttcaaggag
ccggtcgcggtcggctacgcctacttcctgaagctgcaccacctcgtggacgacaagatc
cacgcccggtccaccggcccgtactcgatgatcacccagcagccgctgggtggtaaggcg
cagttcggtggacagcgcttcggcgagatggaggtgtgggcgctcgaggcctacggcgct
gcctacgccctgcaagagctgctcaccatcaagtccgacgacatcaacggtcgcgtcaag
gtctacgaggccatcgtcaagggcgagaacatccccgagcccggcatccccgagtccttc
aaggtgctcatcaaggagatgcagtcgctctgcctcaacgtggaagttctctcccgcgac
ggcatgtccatcgagatgcgcgacagcgaggaagacgtcttccgtgcggccgaagaactg
ggtatcgaccttggtcggcgtgagccgagcagtgtcgaagaggtctga

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