Thermobifida fusca: Tfu_2654
Help
Entry
Tfu_2654 CDS
T00265
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tfu
Thermobifida fusca
Pathway
tfu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tfu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tfu_2654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfu03021
]
Tfu_2654
03400 DNA repair and recombination proteins [BR:
tfu03400
]
Tfu_2654
Enzymes [BR:
tfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tfu_2654
Transcription machinery [BR:
tfu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tfu_2654
DNA repair and recombination proteins [BR:
tfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tfu_2654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AAZ56687
UniProt:
Q47LI5
LinkDB
All DBs
Position
complement(3120711..3124178)
Genome browser
AA seq
1155 aa
AA seq
DB search
MAASRIASANALGPNRVSFARIKEPLEVPNLLALQTESFDWLLGNERWRARVEAARKAGR
KDIPEQSGLEEIFEEISPIEDFSGTMSLSFRDHRFEPPKYSEEECKDKDMTYSAPMFVTA
EFINNDTGEIKSQTVFMGDFPLMTAKGTFIINGTERVVVSQLVRSPGVYFDSQMDKSSDK
ELYGCKIIPSRGAWLEFEIDKRDFVGVRIDRKRKQAVTILLKALGWTTDQILERFGEYES
IRATLEKDPTAGTDDALLDIYRKLRPGEPPTKEAAQALLENLYFNPKRYDLAKVGRYKIN
KKLGLEIDITQGTLTEEDIVATVDYLVRLHAGEKELVRPHGTFPIEVDDIDHFGNRRLRT
VGELIQNQVRLGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIREFFGTSQLSQFM
DQTNPLAGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNIGLIGSL
AAYARVNSFGFIETPYRKVVDGRITDEVVYLTADEEDRYVIAQANTPVNPDGTFAESQVL
ARRKGGEFESVAAEEVHYMDISPRQMVSVATAMIPFLEHDDANRALMGSNMQRQAVPLLR
AEAPLVGTGMEYRAATDAGDVILAEKSGVVEDVTADYITVLADDGTRKTYRVHKFRRTNQ
GTCFNQRPIVEEGQRVEEGQVLADGPSTEAGEMALGKNLLVAYMSWEGHNYEDAIVLSQR
LVEEDILSSIHIEEHEVDARETKLGPEEITREIPNVSEEVLADLDERGIIRIGAEVVDGD
ILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGVRVFSREEGDE
LPPGVNELVRVYVAQKRKITDGDKLAGRHGNKGVIAKILPKEDMPFLEDGTPVDIVLNPL
GVPGRMNIGQIMEMHLGWLAKHGWKVEGDDAEWKRRLRDIGAHEAPPNSKVATPVFDGAR
EDEISGLLSCVLPDQDGDILVNKFGKAKLYDGRTGEPFKEPVAVGYAYFLKLHHLVDDKI
HARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDINGRVK
VYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSRDGMSIEMRDSEEDVFRAAEEL
GIDLGRREPSSVEEV
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
ttggcagcctcgcgcatcgcctccgctaacgcccttggtccgaaccgcgtttctttcgct
cgcatcaaggaaccacttgaggtcccgaacctccttgccctgcagaccgagtccttcgac
tggctgctcggcaacgagaggtggcgtgcccgagtcgaagcggcccgcaaagccggccgt
aaggacattccggagcagtccggcctggaagagatcttcgaagagatcagtccgatcgag
gacttctcgggcacgatgtcgctgtcgttccgcgaccatcggttcgagcctcccaagtac
tccgaagaggagtgcaaggacaaggacatgacctactccgccccgatgttcgtgacggcg
gagttcatcaacaacgacacgggtgagatcaagagccagacggtgttcatgggcgacttc
ccgctcatgaccgccaagggcacgttcatcatcaacggcaccgagcgtgtcgtcgtctcc
cagcttgtccgctcgcctggcgtgtacttcgacagccagatggacaagtcctccgacaag
gagctctacgggtgcaagatcatcccgtcccgtggagcctggctggaattcgagatcgac
aagcgcgacttcgtcggtgtccgtatcgaccgcaagcgcaagcaggctgtcaccatcctg
ctcaaggcgctgggctggaccaccgaccagatcctggaacgcttcggcgagtacgagtcc
atccgcgccaccctggagaaggaccccactgcggggaccgacgacgcgctgctggacatc
taccgcaagctccgcccgggcgagcctcccacgaaggaggccgcgcaggctctgctggaa
aacctgtacttcaaccccaagcgctacgacctcgccaaggtcggccgctacaagatcaac
aagaagctggggttggagatcgacatcacccaggggacgctcaccgaagaggacatcgtc
gccaccgtcgactacctcgtccggctgcacgccggggagaaggagctggtgcgtccgcac
ggcaccttcccgatcgaggtcgacgacatcgaccacttcggtaaccgccggctgcgcacc
gtcggtgagctcatccagaaccaggtccgcctggggctggcccgcatggaacgggtcgtc
cgggagcgcatgaccacccaggacgtcgaggcgataacgccgcagacgctgatcaacatc
cgtccggtcgtcgcctccatccgggagttcttcggcaccagccagctctcccagttcatg
gaccagaccaacccgctggccggcctgacccacaagcgccgcctctccgcgctgggaccg
ggcggtctgtcccgtgagcgggcgggcttcgaggtccgcgacgtccacccgtcgcactac
ggccgcatgtgcccgatcgagacaccggaaggcccgaacatcggcctcatcggctcgctt
gcggcctacgcccgggtcaactccttcgggttcatcgagaccccctaccgcaaggtggtc
gacggccggatcaccgacgaggtggtctacctcaccgcggacgaagaggaccggtacgtc
atcgcccaggcgaacaccccggtcaaccccgacgggaccttcgcggagtcccaggtgctg
gcacgccgcaagggcggggagttcgagtccgtcgccgcggaagaagtccactacatggac
atctccccgcggcagatggtgtcggtcgccaccgccatgatcccgttcctggagcacgac
gacgccaaccgggcgctcatgggctccaacatgcagcgtcaggcggtgccactgctgcgt
gccgaggccccgctcgtgggtaccggtatggagtaccgcgcggccaccgacgccggcgac
gtcatcctggcggagaagtccggtgtcgtcgaggacgtcaccgccgactacatcaccgtc
ctggccgacgacggcacccgcaagacctaccgggtccacaagttccgccgcaccaaccag
ggcacctgcttcaaccagcgccccatcgtcgaagaaggccagcgggtcgaggaaggccag
gtgctcgccgacggaccgtccaccgaggccggtgagatggcgctcggcaagaacctcctc
gtggcgtacatgtcctgggagggccacaactacgaggacgccatcgtgctgtcccagcgc
ctggtcgaagaggacatcctctcctcgatccacatcgaggaacacgaggtcgacgcgcgc
gagaccaagctgggccccgaggagatcacccgcgagatccccaacgtcagcgaggaagtc
ctcgccgacctcgacgaacgcggcatcatccgcatcggtgccgaggtcgtcgacggtgac
atcctcgtcggtaaggtcacgcccaagggtgagaccgagctgaccccggaggagcgcctg
ctccgcgcgatcttcggggagaaggcccgcgaggtccgcgacacctccttgaaggtgccg
cacggtgagtccggcaaggtcatcggtgtgcgcgtcttcagccgcgaggaaggcgacgag
cttcctccgggcgtgaacgaactggtccgcgtctacgtggcccagaagcgcaagatcacc
gatggcgacaagctcgccggacggcacggcaacaagggtgtcatcgccaagatcctcccc
aaggaagacatgcccttcctggaggacggcacccccgtggacatcgtgctcaacccgctg
ggtgtgcctggccggatgaacatcggccagatcatggaaatgcacctcgggtggctcgcg
aaacacgggtggaaagtcgaaggcgacgacgccgaatggaagcgccggctgcgtgacatc
ggggcacacgaggcaccgcccaactccaaggtcgcgacgcccgtcttcgacggtgcccgg
gaagacgagatcagcggtctgctgagctgcgtcctgcccgaccaggacggcgacatcctg
gtcaacaagttcggcaaggccaagctgtacgacggacgcaccggcgaaccgttcaaggag
ccggtcgcggtcggctacgcctacttcctgaagctgcaccacctcgtggacgacaagatc
cacgcccggtccaccggcccgtactcgatgatcacccagcagccgctgggtggtaaggcg
cagttcggtggacagcgcttcggcgagatggaggtgtgggcgctcgaggcctacggcgct
gcctacgccctgcaagagctgctcaccatcaagtccgacgacatcaacggtcgcgtcaag
gtctacgaggccatcgtcaagggcgagaacatccccgagcccggcatccccgagtccttc
aaggtgctcatcaaggagatgcagtcgctctgcctcaacgtggaagttctctcccgcgac
ggcatgtccatcgagatgcgcgacagcgaggaagacgtcttccgtgcggccgaagaactg
ggtatcgaccttggtcggcgtgagccgagcagtgtcgaagaggtctga
DBGET
integrated database retrieval system