Tsuneonella flava: IDJ81_13080
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Entry
IDJ81_13080 CDS
T07616
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tfv
Tsuneonella flava
Brite
KEGG Orthology (KO) [BR:
tfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfv03016
]
IDJ81_13080 (thpR)
Enzymes [BR:
tfv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
IDJ81_13080 (thpR)
Transfer RNA biogenesis [BR:
tfv03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
IDJ81_13080 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
BSP
Motif
Other DBs
NCBI-ProteinID:
QSB46200
LinkDB
All DBs
Position
2794522..2795055
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AA seq
177 aa
AA seq
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MPRLFVALRPPVAVRDVLIDTMDGVAAARWQDDAQLHLTLRYIGETDPRVADDLVDALGR
IDAPRFELAVRGVGFFERKGQPTALWAGVAPNAALDTLQKKVERVCQSVRLEAEHRKFTP
HITLARLNSAAGPVAPWLAQHSRLAAPAWPVDSVRLYESTLTPGGSQYDPVVEWRLR
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
ctgccccgcctgttcgtcgctctgcgcccgccggtcgccgtgcgcgacgtgctgattgac
acgatggacggcgtggccgccgcccgctggcaggacgatgcacaactgcacctgaccttg
cgctatatcggggaaaccgatccgcgcgtggcggacgatctcgtcgatgcactcggccgg
atcgatgcgccgcggttcgaactggcagtgcgcggtgttggctttttcgaacgcaagggg
cagcctaccgctctgtgggcaggcgtggcccccaatgccgcactcgataccttgcagaag
aaagtcgaacgggtgtgccagtcggtcaggctggaggcggaacaccgcaagttcacgccg
cacatcacgctcgcccggctgaacagcgcggcggggccggtggcgccctggctggcgcag
cattcgcggctggccgcgcctgcctggccggtcgatagcgtccgcctgtacgaaagcacg
ctgacacccggcggatcgcaatacgatccggtggtcgaatggcggctgcgatga
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