Thalassovita gelatinovora: HFZ77_11445
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Entry
HFZ77_11445 CDS
T06533
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
tgl
Thalassovita gelatinovora
Brite
KEGG Orthology (KO) [BR:
tgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgl03400
]
HFZ77_11445 (addA)
Enzymes [BR:
tgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HFZ77_11445 (addA)
DNA repair and recombination proteins [BR:
tgl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HFZ77_11445 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QIZ81038
LinkDB
All DBs
Position
2355259..2358639
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AA seq
1126 aa
AA seq
DB search
MTRDEATEKQVQAARPKHSTWLSANAGSGKTRVLTDRVARLLLEKVQPQHILCLTYTKAA
ASEMQNRLFKRLGEWAMLDAGLLRDQLVALGVAGPVTDEDLRNARTLFARAIETPGGLKI
QTIHSFCSSLLRRFPLEARVSPQFAEMEERAASLLRAEIVQDLADGPDAAVVRRVAHHFT
GEDFDSLTASVVQQRVLLQTPLGPDECRALFDLDPGFDEETLRSTVFLGDEDDLLQGVLT
HLQGGSANDVKAADKLRLLSRFDLNALPVLESIFLFGESAKSPFGAKIGSFPTKKTQTGM
GPLLPRLEDFMRRVEDARAKRLALAAAHKTHALQDFARVFLPAYEARKQKMGWLDFDDLI
LKARDLLTNPAVAAWVLYRLDGGIDHILVDEAQDTSPAQWKVIELLAQEFTSGAGARSEV
ERTIFVVGDKKQSIYSFQGADPREFDRMQAEFAQRLATTERPLNEMELQFSFRSSQAILA
LVDEVFRGREASGFHTGSEHRAFKDRMPGRVDLWPVVEKTDEDEDDDWDSPVDRLGMKHH
SVLLAERIARQIRRMIDEKETVPAEIGHSGDYQMRPVSEGDFLILVQRRSDLFAEIIRAC
KEQGLAIAGADRLKVGAELAVRDLAALMNFLATPEDNYSLAVALKSPLFGWNEQKLFDFS
HRRSEKYLWQALRQRREEIPEVMSVLDDLRSRADYMRPYDLIERILTRHDGRRKLLARLG
AEAEDGINAFLSQALAFERSAIPSLIGFLQWMETDDLEIKRQMDSAGNRIRVMTVHGAKG
LEAPIVILPDTAKRTVQLRDDVLTDDGQVMWRTVSGQMPERMQAARDKRLSAEEAERDRL
LYVAMTRAEKWLIVAAAGDLGKDGQSWYEKIGTAMERLGAKAQSFAFGDGLRLCHGDWSG
EAAPVPEPEKSETVNLPGWAQAPAPVPRIIPKTLSPSDLGGAKALPGEDNLDEDAAKLRG
RQIHLLLEHMPDVPQSDWPGLAEKLLGRGTDAAASGEIPALLAEVVRVLTEPDLLPLFSA
EALAEVPVSATIAALNNRRIHGTIDRLIITKKSILAVDFKTNAVVPEKPEDCPLGLLRQM
GAYAHALVQIYPYHQVQTAILWTRTARLMTLPAALTTQSLESTCPT
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtgacgaagccaccgaaaaacaggttcaggcggcacgaccgaaacattcgaca
tggctatcggccaatgccgggtcgggcaagacgcgggttttgaccgaccgggtcgcgcga
ttgctgttggaaaaggtgcaaccgcaacacatcctgtgcctgacctataccaaggccgcc
gccagcgagatgcagaaccggctgttcaaacggttgggggaatgggcgatgctggatgca
ggtctgctgcgtgatcagttggttgcgctgggcgtggccgggcctgtcactgacgaagat
ctgcgcaatgctcgcaccttgttcgcccgcgccatcgaaacgcccggcggcctgaaaatc
cagaccatccattccttctgctcctctctgttgcggcgtttcccactggaagcccgggtc
agcccgcaatttgccgaaatggaagaacgcgcagcatcgcttttgcgggctgagatcgtg
caggatctggctgatgggccggatgcggcggtggtccggcgcgtagcgcatcatttcacc
ggcgaagatttcgacagcctgactgcctcggttgtacagcaacgggtcttgttacagacc
cctttggggccggatgaatgccgggcgcttttcgatcttgatcccggtttcgacgaagaa
acattacggtcaacggtatttctgggcgatgaggatgatctgctgcaaggggtccttaca
catctgcaaggtgggagcgcgaatgacgtcaaggcggcggataagctgcggttgctttcc
cgcttcgacctgaatgcccttccggttttggaatccattttcctgttcggagaaagtgca
aaatccccgtttggggccaagatagggtcttttccgaccaagaaaacccaaaccgggatg
ggtccgcttctgccccggcttgaagacttcatgcgccgggtcgaagatgcgcgggccaaa
aggctggcgctggcggcggcgcataaaacacatgccttgcaggatttcgcccgtgtcttt
ctgcccgcctacgaagcgcgcaaacagaagatggggtggctcgatttcgacgacctgatc
ctgaaagcgcgtgatttgctgaccaacccggcagtcgcggcctgggtgctttaccggctt
gatggcggtatcgaccatattctggtcgacgaagcgcaggataccagcccggcacagtgg
aaggtgatagagctgttggcgcaggagttcacctctggcgccggggcacgatccgaggtg
gagcgcacgattttcgttgtcggcgacaagaaacagtcgatctattccttccaaggcgcc
gatccgcgcgaattcgaccggatgcaggccgaattcgcccagcgtcttgccacgaccgaa
cggccactgaacgaaatggaactgcaattcagcttccgttcgtcccaggcaattctggcg
ctggtcgacgaggtgtttcgcggccgcgaagcttcgggtttccataccggatcggaacac
cgggccttcaaggaccggatgccggggcgggtcgatctgtggccggtggtagaaaaaacc
gacgaggatgaagacgacgattgggacagcccggtggaccggctggggatgaaacatcat
tcggtccttctggccgaacggattgcgcgtcagatccgaaggatgatcgacgaaaaagaa
actgttccggcggaaatcggacatagcggcgattatcagatgcgcccggtcagcgaaggt
gacttccttattctggtgcagcgtcgatcggatctctttgctgaaattatccgtgcttgc
aaggaacaggggctggccatcgcaggggccgaccgtctgaaggtcggggcagaactggcg
gtgcgcgatctggccgcgttgatgaatttcctcgccacgccagaagataactattcactg
gcggttgccttgaaatctccgctgttcggctggaacgaacagaagcttttcgatttttcc
catcggcgtagcgaaaagtatctgtggcaggcattgcggcagaggcgagaggaaatcccc
gaagtcatgtcggttctggacgatctgcgcagccgtgccgactacatgcgcccatatgac
ctgatcgaacgcattctgacccggcatgatggccggcgcaaattgctggcgcggttgggg
gcagaggccgaagatgggatcaacgcgtttctgtcccaggccctggcctttgaacgcagc
gcgattcccagcctgatcgggttcctgcaatggatggaaaccgacgatctggaaataaag
cggcagatggacagcgccgggaatcgcatcagggtgatgaccgtgcatggcgccaagggg
ctggaggcgcccatcgtgattctgcccgataccgccaagcggaccgtgcagttgcgcgat
gacgtgctgactgacgacggccaagtgatgtggcgcacggtcagtggccagatgcccgaa
cgcatgcaggccgcgcgcgacaaacggttgagcgcggaagaagcggaacgtgaccgactg
ctttacgttgccatgacgagggccgaaaaatggctgatcgtggcggcggctggtgatctg
gggaaggacgggcaaagctggtatgaaaagatcggcaccgcgatggaacggttgggggcc
aaagcacagtcgttcgcgtttggcgatggtctgcggctctgccatggcgattggagcgga
gaggccgcgccggtgcccgagcccgaaaaatccgaaacggtcaatttgcccggatgggcc
caagcgcccgccccggtaccacggataataccgaaaacccttagcccgtcagacttgggc
ggcgccaaggcattgcccggtgaagacaatctggacgaagacgccgccaaattgcgtgga
cgtcaaattcacctgctgctggaacatatgcccgacgttcctcaaagcgattggccaggt
ctggccgaaaaattgctgggacggggcacagatgcggcggcaagcggcgaaatcccagcc
ttgctggctgaagtggtcagggtactgaccgaaccggacctgctgccgttgttcagcgcc
gaagcattggccgaagttccagtcagcgccacgattgccgccctgaacaaccggcgcatt
cacggcacaatcgacagattgatcatcacgaaaaaatcaattctggcagtggatttcaaa
accaacgccgtcgtgccggaaaaacccgaagactgcccactgggcttgttgcggcaaatg
ggggcctatgcccatgctttggttcagatttatccctatcatcaagtccagacggcaatc
ctgtggacccgtacggcacggctgatgacgctacctgcggcattgacgacacaatccctt
gagtccacctgcccgacttga
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