| Entry |
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| Name |
(RefSeq) CCR4-Not complex component, Not1 protein
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| KO |
| K12604 | CCR4-NOT transcription complex subunit 1 |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:tgo00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TGME49_291140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:tgo03019]
TGME49_291140
Messenger RNA biogenesis [BR:tgo03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TGME49_291140
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TGME49_291140
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
IX:join(4150030..4150561,4150783..4151325,4151687..4152539,4153079..4154222,4154559..4154877,4155308..4155522,4155795..4156823,4157195..4157459,4157752..4158197,4158657..4160872,4161083..4161209)
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| AA seq |
2562 aa
MGDPGGGDSVFPSLKATGSSATGPSTGTSSHSGAGGSTSGNAVSASATSFAGSSTGTGAS
LGSGSATNNNSGLGTEHNAQNGEEGTSGKAPMTGSPTAGGVSCSAASAGEADGVSLRGPP
AQAASATGNENGAKNGPPGGGAAGAPVSQAQQLLAVAGKPAQDFEAEVNSCFQKMYSGIY
SVDMVVALLQRLSQAPPGSRDSSLFVSMIRTLFFECRHFPKYPPHELALTAELFGQLIHR
HVLINSGNSLMIALRCVLEAIRKGPTSKMFVFGIAALEQFLDRIFLFPQFLVALASLSEL
QQQHPHYTHYAQSVLLLIPEKYHSLVVLDPRIAASLPPMPDLPPVVGVAAAARQAAGTGI
GEVTQTSEPPSGSSISTMLPPPHGLQHPVTASIQQQLAAAAKMMNLSSSPPAAPGNSGSA
LNLAHNSSLLQGNPVPTPPLAASPTQNVSGNPGSLPGLGQANVPASGTGAVGNKAGLSGL
GNAAGSISHTGTLGGVLGAGALLQGVGLGQVEGLMNDHDITAKLEQPPQWVADQVIAVCN
SVCEGNVDDKAESLKDVLTEEHAPWLTYYIVKSRAAKEPNLHGIFVLFIEKLKLPGLWDA
VINMTYDCIHVLLKYVDEAKESSSYRTLLKNLGLWLGSITLARNRPLKSKRMDLKQLLFT
GYEQGHLVAVLPLVCKILEGIKTSKLFKPPNPWTVAVMSLLAEIHLQPNIRTNLVFEVEV
LFKHLHLNVLEYHNRTDHLTKRSPPPGSADFVVRAAAAGVAPATAASGHLGAAGGGIPPG
PQATAGRPGTAAASGGVPGAVRGTPGSMVGRLPGGASGLSLNAVAAAAALGLGPAGGAGA
PGSGADPSSSRLGAQHRRGLQGLGPGALGQLDAASGAHGRLMEAAAAVASAAAGMGRHGG
TSGTGASLGGTPQAGVASGPPVPGVGLQQGPGGAGGNAQNVGATGVGMLQSPNQGEGGAG
PSPDGLEIGGHLRVGSDDGAGGVLALGGGRDGHHLSVGEPGSGAGLMGGPGGGGYGGMGQ
HGGPPSTHPASWSSSLFQGGGGVMTPPPHYPHGALLPLLGSLGGSGTEQGSSIGSSGVFQ
PDRLLQNLSQSVVISPSIALLSIQPNLRPLVPLAVDRAIREIISAVVERSVTISCVTTRE
LVCKDFCMESEESLVKRAAHLMVASLAGSLALVTCREPLRVSLSQNLRQLLQPAASSDCN
DQVLIEQVVQIVSADNLELGCSLIEQAVVEKVLRDIEQTMQPALLVRRQARERGIPFVDT
NYINSSRWTLNLPEPVKLRPVLNNRQLQVYKDFLSIGPLKKMQQDNAGPNSGMMSGSGPH
GAQTGGLGAPGSTPGPLQGAGGASAAGGAAQMGLGANSGNSGLVGASGSVPPHTHQLGAV
MGEGPSGAFQGLPGRNLIGPSNASSFLGRENMLHQHLAQQHAARLLGQQQGNKFLASLGH
PQVNAASGPPGGPSLAGAGGANAGQLLVQNTGEGGRVLGSPAGTSVASASIGCGVREPIL
LQPMGEAHLSTVMARLEDCLVQLRDVVRDIFTCPPIVPTPSTVDTYSTPAGSQVCALPVP
HCATPVLTVFACLPSNHEVFQLILAVSAIAGSCPRVEEVAPALAHKLIKSVFEGASLAAS
RTSHNAIRGIDPTGLYMEVFFAVLAALRRQSDVVSKLAGEVLSISCSSATIPPKKSNTTV
AAGLVRYRLVSLAAFDLVLANHLDNGRNVAVLEFILALLKTLLDQKAITPADLPTTFKTL
AEAPATTLPAKLVQLKGWQPLPMAEARTKLVEAFREDQEERKKSPHERLTTMTELMESYY
SVNPVRVRSLPCLPVTPQKDRQLITMIFGEWLRFCACVSPFGGPNGDRGASTLGAQGGAG
GGTSGNFGNTDSASLLRATFFQRVSHQGLLRMDEDTDRFFAVCVEEAIARSLRFREDSKS
AAEETSEDGSKAGDKSEGAAGAKCSGENAKGAKAPAGEPEAEAKKDEQKGNVEEAKEEGR
AAEESETMSRAADREEASKPGKGATSLAAKNEKSEGEKEPSSEAGEKGALGPSQAGGRRL
SAGLASCPILEYDSATVTPESLTAMQTPPEETEPLLDLTPLDAMAKMIVGMMRLVDPVQI
SPVMILQRALGIVCRHIHMEAERLGPAFNQRPYYRLLLAILLEITAPATKDGNGSGGAQA
GASGASGSDGKAVLGGGVSESQVLPSLLSFAEHLALLSPTRVPAFAFAWLGLVGHRLFMP
RLLKSGRGWATLHRLLLLHLEFLQPLLRNVALSDSIRLLYKGALRILLVLLHDFPEFLCE
YHFSFCDVLPLNCVQLRNVVLSAFPRNMKLPDPFLPNLKVDLLADIKTVPRILSSFTVTL
LQKGLKKDIDAFWQTRDAALLPQMKAKFLVDRESAVRIGTKYDVSLLNAFLLYVGTGVPE
RVGASDGPALIMDAMLGIASLGGASGARGELSPSLEILLYMSKELDMEGRYLLMSALANH
LRYPNAHTHYFSCVLLWLFGESRDELIQEQITRVLLERLIVHRPHPWGLLITFIELIKNP
RFNFWSCSFVSAAPEVEKLFQSVAHTCLGQSGAQQLQQQRRR |
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| NT seq |
7689 nt +upstreamnt +downstreamnt
atgggggatccaggtggaggcgactcggtcttcccttcgctcaaggcgactggatcttca
gccaccggtccatctacaggcacgagctcacattcgggagcggggggctctacgtccggc
aacgcagtttcagcgtctgcgacgagtttcgccggttcctccacggggacaggagcgtcg
cttggctcgggttctgctacgaacaacaacagcggcctagggactgaacataatgctcaa
aacggagaggaggggacctctggcaaggccccgatgaccgggtcccccactgcaggcggc
gtctcctgttcggccgcgtcggcgggcgaggcggacggagtgtctcttcggggccctccc
gcgcaagcagcctcggcgaccggcaacgagaacggagcaaaaaatggaccgcctggcgga
ggagccgcaggcgcccctgtctcacaggcacagcagctcctcgctgtcgccggcaagcct
gcacaggatttcgaagctgaggtgaacagctgcttccagaaaatgtactcaggcatctac
tccgtggacatggtagtggcgcttctgcaacgtctgtctcaggctccaccgggctcccga
gacagcagtttgttcgtgtcgatgattcgaactctcttctttgaatgtcgccacttcccg
aagtacccccctcacgagttggctctgacagccgagctgtttggccagctgattcaccgc
cacgtcctcatcaacagcggcaactctctgatgattgcgttgcgctgcgtgttagaggcg
attcgcaagggtccgacctcgaaaatgtttgtctttgggattgcagctctcgaacagttt
ctggaccgcatcttcctcttccctcagttcctcgtcgcccttgcctcactcagcgaactg
cagcagcagcatccgcattacacccactatgcacaatctgttcttcttctgattccggaa
aagtaccacagcctcgtcgttctagatccgagaatcgcagcttctctcccccccatgccg
gacctgcctcctgtggtgggcgtcgctgcggcagcgcgacaagccgctgggacaggcatc
ggcgaggtgacccagacgtcggagccgccgtctggctcttcgatctccacgatgttgcct
ccaccacacggactccagcaccccgtgacggcctcgattcaacagcagctggcagctgcc
gcaaagatgatgaacttgtcttcgtctccgccagcggctccgggcaacagcgggtcggcg
ttaaacttggcacacaactcgtctttgcttcagggcaaccccgttccaactccgcccctg
gctgcgtcgccgactcagaacgtttcaggaaatcctgggagtctccctggactgggacag
gccaacgtgccggccagcgggacaggagccgtggggaacaaggcaggactgtcggggctt
gggaacgcggcggggtcgatttcacacacagggacccttggaggcgtgttgggcgcaggg
gcgttgctgcagggcgtcggccttggtcaagtcgagggcttgatgaacgaccacgacatc
accgcgaagctggagcagccgccgcagtgggtggctgaccaggtcattgcggtctgcaac
agcgtctgcgaggggaacgtcgacgacaaagcggagagtttgaaagacgttttgacggag
gaacatgccccgtggctgacgtactacatcgtgaagagtcgagccgcgaaggaacccaac
ctacacggaatctttgttctcttcatcgaaaaattgaagctcccaggcctctgggacgcc
gtcattaacatgacctacgactgcatccatgtcctcctcaaatacgtcgacgaagccaag
gagtcgagctcgtatcgaactctgctaaaaaacctcggcctgtggctcggatccatcact
ctagctaggaaccgaccgttaaagtcgaagcgcatggacctgaagcagctgttgttcacg
gggtacgagcagggacatcttgtggctgttctgccgctggtgtgcaagattttggaaggc
atcaagacgtcgaagctgttcaagccgccgaatccgtggactgtggcggtgatgtcgctt
ctcgccgagatccacttgcagccgaacattcgaacaaatttggttttcgaggttgaagtt
cttttcaagcacctccacctcaacgtgttggagtaccataaccgcacagaccacttgacg
aagcggtcgccgcctccgggctccgcggacttcgtcgtccgcgccgcggccgcgggtgtg
gcgcctgcaaccgcagccagcgggcaccttggagcggcaggcggcggcattccgccaggg
ccccaggcgactgcagggcgccccggaacggcggccgccagcgggggagttccaggagcc
gtacgcggcacgccgggctcgatggtcggacgcctccctggcggcgcttcgggcctgtct
ctgaacgctgttgcagccgcggctgcccttggcttgggacccgcaggaggcgccggcgcc
cccggctcgggcgctgacccctcgtcctcgcgcctcggcgcgcaacaccgcaggggcctg
cagggccttggacccggagctctcgggcaactggacgccgcgtctggagcccatgggcgc
ctcatggaggcggcggccgccgtggcctcggccgccgcgggcatgggccggcacggcggc
acttcggggacaggtgcctccctcggcgggacgccgcaggccggcgtggcttccggccct
ccagtgcccggcgttgggctccagcagggcccagggggcgcgggaggaaacgcgcagaac
gtgggggcgacaggcgtcggaatgctccaaagtccgaaccaaggagagggaggagcaggg
cccagtcctgatgggcttgagatcggtggccacctgcgtgtgggctctgacgacggcgcc
gggggggtcctggccctcgggggcggaagggacggtcaccacctgtcggtgggtgagccc
ggatccggcgcgggccttatgggaggcccaggaggtggtggctacggtggcatgggccag
cacggtggaccgccgtccactcaccccgcttcgtggtcttcatcgctcttccagggcgga
ggtggagtcatgactcctccgccccactaccctcacggggccctgctgcccctgctgggg
tctctgggggggtcggggacggagcaggggtcgagtatcgggtcctcgggtgtgttccag
cccgatcggctgctccagaatctcagccagagcgtcgtcatttctccctcaattgctcta
ctcagcattcaacccaacctgcgccctctggtgccgctggcggtggacagggccatcaga
gagatcatttccgctgtcgtcgagcgctcagtgacaatctcttgcgtgacgacgcgggaa
ttggtgtgcaaagacttctgcatggagagcgaggagtctctcgtgaagcgagcggcgcac
ctcatggtggcttctttggcggggtctcttgctctcgtcacatgcagagagcctttgcga
gtttccctcagtcagaatctgcgccagctgctgcagcctgcggcttcgagcgactgcaat
gaccaggtgttgatcgagcaagttgtccagatcgtgtcggcggataacctcgagctgggc
tgctcgctaattgagcaagccgtcgtggagaaagttcttcgggacatcgagcagacgatg
cagcctgcgcttctggttcggcgccaggcgcgagagcggggcatcccgttcgtagacacg
aactacatcaatagcagtcggtggaccctgaatcttccggagccagtgaagctgcgcccc
gtgctgaacaaccggcagctgcaggtgtacaaggatttcttgagcatcgggcctctgaag
aagatgcaacaagataacgcgggtccaaacagcgggatgatgtcgggcagcgggccgcac
ggcgcacagaccgggggcctgggcgcgccgggatcgacgccggggcctctccagggggct
ggcggggcctccgcggctggcggggcggcgcagatggggttgggggcaaacagcggaaac
tcagggctcgtgggagcgtcgggctccgtcccaccccacacccaccagctgggtgcggtc
atgggcgaggggccctccggcgcgtttcagggcctgccggggcgaaacctgattgggccg
agcaacgcgtcgagcttcctagggcgagaaaacatgcttcaccagcacctcgcccaacag
cacgcggctcgacttctaggccagcagcaggggaacaagtttctggcctccctcggccac
ccgcaggtgaacgccgcgtctggtccacccggcgggccttctttggcgggcgcgggaggt
gcaaacgcaggccagctcctcgtccaaaacaccggtgagggcggacgagtcctagggtca
ccggcggggaccagcgtggcgagcgccagcatcgggtgcggtgtgcgcgagccgatcctc
ctgcagcccatgggcgaggcccatttgtccactgttatggccaggctggaagactgtctt
gtgcaactcagagacgtggttcgggatatcttcacatgtcccccgatcgtgcctacgccc
tctaccgtggacacgtactcgacgccagcaggcagccaagtctgtgcactgccagtgccc
cattgcgcgactccagtgctgacagtgttcgcatgcttaccgtcaaatcacgaagtgttc
cagctgattctcgcggtctcggccatcgcaggcagctgtccgcgcgtagaggaagtcgcc
ccggcacttgcccacaagctcatcaagagtgtgtttgagggcgcgtctctggcggcaagc
agaacgagccacaacgcgatccgaggcattgacccgacaggtctttacatggaagttttc
ttcgctgttcttgcggcgctccggcgccagagcgacgtggtgtcgaagctggctggagag
gtcctgagtatctcgtgctcctccgcgacgataccaccgaagaagagcaacacgaccgtc
gctgcgggtcttgtgcgctaccggctcgtgagcttggcggcgttcgacctggtccttgcg
aatcacctggacaacggaagaaacgtggcggttctggaattcattctcgcccttctcaag
actctcctggatcagaaggccatcaccccagctgacttgccgaccaccttcaagactctc
gcagaggcgcctgcgacgacgctgcctgctaagcttgtccagctcaagggatggcagccg
ctgcccatggcagaggcgcggacgaagctcgtggaggcgttccgcgaggaccaagaagaa
cgaaagaagagtcctcacgagcgcctgacgacgatgacggagctgatggagtcgtactac
agcgtcaacccggtgcgggtccgcagtttgccgtgtctgccggtgacccctcagaaggac
cgccagctgattacgatgattttcggggagtggcttcgcttctgcgcgtgcgtgagtccg
tttgggggtccgaacggcgaccgcggcgcctcgacgcttggggcccagggcggcgcaggc
ggcgggaccagtgggaactttggaaacaccgacagtgcgtctcttcttcgcgcgaccttt
ttccagcgagtgtctcatcagggtctgttgcgcatggacgaagacacagatcggttcttc
gcggtgtgcgtagaggaggccattgctcgctcgctgcggttccgagaggactccaagagt
gcagcagaagagacctctgaggacggctcaaaggctggagacaagagcgagggagccgcg
ggggcgaagtgttcgggcgagaatgcaaagggggcgaaagcacccgcgggagagccagag
gctgaggcgaaaaaggatgagcagaaagggaacgtagaggaagcgaaggaagaaggccgg
gccgccgaagaatcggagacgatgtctagagccgcagacagggaagaggcgtcgaaaccc
ggaaagggggcaacctcgcttgcggccaagaacgagaagagcgagggagaaaaggaacct
tctagcgaagcgggcgaaaagggagcgctggggccgagccaggctggaggccggcgcctc
tcggctgggctcgcctcttgtcccattcttgagtatgactcggcaaccgttacccctgag
agcctaacggccatgcagacaccaccggaggagacagagccgctgctcgacttgacacct
ctcgatgcgatggccaagatgattgtggggatgatgagactcgtcgaccccgtccagatc
tctccggtgatgattctccagcgggctttgggcatcgtctgccgacacatccacatggag
gcggagcgtctaggcccagctttcaaccagcggccgtactaccgtcttcttttggcgatt
cttctggaaataacagctccggcgacgaaggacggcaacggctcaggcggcgctcaagcc
ggcgcgagcggtgcgagcgggagtgacggcaaggcggtcttggggggcggtgtgagcgag
agccaggtgttgccttcgctgttgtctttcgcggaacatttagcccttctgagtccgacg
cgtgtaccggccttcgcatttgcttggctcggcctcgtgggccaccgcctgttcatgccg
cgcctgctgaagagcggccgcggctgggcgactctccaccggctgctgctgcttcatctc
gagttcctgcagccgcttctgcggaacgtcgcgctctccgacagcattcgcctcctgtac
aagggtgcgctccgcattctccttgtcctgctccacgacttcccggagttcctctgcgag
taccacttctcgttctgcgacgttctgccgctgaactgcgtgcagctgcggaacgtggtt
ctctcggccttcccgcgaaatatgaaactccccgatccgttcctaccaaatttgaaggtc
gacctgcttgcggacataaagacggtgccccggattctctcgagcttcaccgtcacgctc
ctgcagaagggcttgaagaaggacatcgacgcgttctggcaaacccgggacgcggcgctg
ctgccgcagatgaaggccaagttcctcgtagatcgcgagagcgccgtccgaatcggcacc
aagtacgacgtctcgctcctcaacgccttcctcctctacgttggcacgggcgtccccgag
agggtcggagccagcgatggacccgccctgatcatggacgcgatgctcggtatcgccagc
ctcggcggcgcgtccggggcgcggggcgaactgtctccgtctttggagattctgctctac
atgtcgaaggaactcgacatggagggtcgctacctcctcatgtctgctctcgcgaaccac
ctgcggtacccgaatgcccacacgcactacttctcgtgcgtccttctgtggctctttggc
gagtcgcgcgatgagctgatccaagaacaaatcactcgcgtcctcctagagcgcctcatc
gtccacaggccgcacccttgggggctcctcatcaccttcattgaactcatcaagaatcca
aggttcaacttttggagttgctctttcgtttcagctgcaccggaggtggagaaacttttc
cagtctgttgctcacacgtgtttgggtcaaagtggagcccagcagctgcagcagcaacgc
cggcgctga |
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