Thioalkalivibrio sulfidiphilus: Tgr7_2331
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Entry
Tgr7_2331 CDS
T00840
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tgr
Thioalkalivibrio sulfidiphilus
Pathway
tgr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tgr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tgr7_2331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgr03021
]
Tgr7_2331
03400 DNA repair and recombination proteins [BR:
tgr03400
]
Tgr7_2331
Enzymes [BR:
tgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tgr7_2331
Transcription machinery [BR:
tgr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tgr7_2331
DNA repair and recombination proteins [BR:
tgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tgr7_2331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
ACL73411
UniProt:
B8GV65
LinkDB
All DBs
Position
complement(2452871..2456947)
Genome browser
AA seq
1358 aa
AA seq
DB search
MAYSYTEKKRIRKDFGKRPQILDVPYLLTTQLDSYRQFLQADRSEDNRQDVGLHAAFKTV
FPIVSYSGTVELEYVSYRLGKPVFDVKECQLRGMTYAAPLRVLLRLVIYDKDAPAGSRVV
KDIKEQEVYMGELPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKLLFNA
RVIPYRGSWLDFEFDPKDSVFVRIDRRRKLPATVLLRALGMETEEILATFFETNTVSITK
DGFDMELIPERLRGEVAAFDFKVKNKVLVESGRRITARHVRELEAAGIKSLEVPAEYLVG
KVLAHAVIDEDSGELVANANDEITDELLKKLRAAGIKSFKTLYTNDLDHGPYISTTLNID
TCRSQLEAQVEIYRMMRPGEPPTKEAAENLFNNLFFTEERYDLSAVGRMKFNRRVGREEI
TGPGVLDKDDILAVLKTLIDIRNGNGQVDDIDHLGNRRVRSVGEMAENVFRVGLVRVERA
VKERLSVAESEGLMPQELINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLAVYARTNDYGFLETPYRKV
ENGKVTNEIVYLSAIEEGQYVIAQANASLDAKGNLVDELVSCRHANEFTMSTPDKIEFMD
ISPKQIVSVAAALIPFLEHDDANRALMGSNMQRQAVPCLRAETAVVGTGIERTVAIDSGS
SIVARRGGVVDSVDAARIVVRVNDDETEAGEPGVDIYNLTKYTRSNQNTCINQRPLVNVG
DVLARGDVLADGSSTDLGEMALGQNMMVAFMPWNGYNFEDSILISERVVQEDRFTSIHIE
ELTCVARDTKLGPEEISADIPNVSESLLSKLDESGIVYVGAEVKPNDILVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMEGTVIDVRVFTRDGVDKDKRALQIEEAALA
AVRKDLKDQLRIYEDDIYDRVEKLLVGKLAAGGPNKLKDGTKVTKTYLTEVPREKWFEVR
MRTEEVNEQLEKMAASLKEQHEAFETRFKEQKEKLTQGDDLAPGVLKMVKVYLAVKRRMQ
PGDKMAGRHGNKGVVSMIVPVEDMPYLEDGTPVDIVLNPLGVPSRMNVGQVLETHLGWAA
KGLGQKIGRMVEAKAKIDELRKFLDKIYNHSAKKVDLSDFSDEEILKLCANLKKGVPMAT
PVFDGAEEEEIKAMLKLADLPESGQTTLFDGRTGESFDRPVTVGYMHMLKLNHLVDDKMH
ARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRNKM
YKNIVDGDHRMEANIPESFNVLMKEIRSLAINIELEQD
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggcctacagctacaccgaaaagaaacgcatccgcaaggatttcggcaaacgcccccag
atcctcgatgtcccctacctgttgaccacgcagctggattcataccgccagtttctgcag
gccgaccgcagcgaggataatcgacaggacgtgggcctgcacgcggcgttcaagacggtg
ttccccattgtgagttactcgggcaccgttgaactcgaatacgtgagctaccgcctcggc
aagccggtgttcgacgtcaaggagtgccagctgcgcggcatgacctatgccgctcccctg
cgcgtgctgctgcgcctggtgatctatgacaaggacgcccctgcgggctcccgcgtggtc
aaggacatcaaggagcaggaagtctacatgggcgaactgccgctcatgaccgagaacggc
accttcgtgatcaacggtaccgagcgggtgatcgtctcccagctgcaccgttcgccgggc
gtgttcttcgaccacgacaagggcaagacacacagctcgggcaagctgctgttcaatgcc
cgcgtgatcccctaccgcggttcctggctggacttcgagttcgatcccaaggacagcgtg
ttcgtgcgcatcgaccgccgccgcaagctgccggccacggtgctgctgcgcgccctgggc
atggagaccgaggagatcctcgccaccttcttcgagaccaacaccgtcagcatcaccaag
gacggtttcgacatggagctgatccccgagcgtctgcgcggtgaagtggcagccttcgac
ttcaaggtgaagaacaaggtgctggtggaaagcgggcgtcgcatcaccgcccgtcacgtg
cgcgagctggaggccgccgggatcaagtccctggaagtgcccgccgagtacctggtgggc
aaggtgctggcccacgcggtcatcgacgaggacagcggcgagctggtggccaacgccaac
gacgagatcaccgatgagctgctgaagaagctgcgcgccgccggcatcaagtcgttcaag
accctgtacaccaacgacctggaccacggtccgtatatctccaccaccctgaacatcgac
acctgccgctcccagctggaggcgcaggtggagatctaccgcatgatgcgtcccggcgag
ccccccaccaaggaggccgcggagaacctgttcaacaacctgttcttcaccgaggagcgc
tacgacctctccgccgtgggccgcatgaagttcaaccgtcgcgtgggccgcgaggagatc
accggtcccggcgtgctggacaaggacgacatcctggcggtgctcaagaccctgatcgac
atccgcaacggcaacggccaggtggatgacatcgaccacctgggcaaccgccgcgtgcgt
tccgtgggcgagatggcggagaacgtcttccgtgtcggcctggtgcgcgtcgagcgcgcc
gtgaaggagcgcctgagcgtcgccgagagcgaaggcctcatgccccaggaactgatcaac
gccaagcccgtggcggcggcggtgaaggagttcttcggctccagccagctgtcccagttc
atggaccagaacaacccgctctccgaggtgacccacaagcgccgcatctcggccctgggc
cccggcggcctgacccgcgagcgtgccggcttcgaggtgcgcgacgtgcacccgacccat
tacggccgcgtgtgcccgatcgagacccctgaaggtccgaacatcggtctgatcaactcc
ctcgccgtgtatgcacgtaccaacgattacggtttcctggagaccccctaccgcaaggtg
gaaaacggcaaggtgaccaacgagatcgtgtacctgtccgccatcgaggaaggccagtac
gtgatcgcccaggccaacgccagtctggatgccaagggcaacctggtggacgaactggtg
tcctgccgccacgccaatgaattcaccatgtccaccccggacaagatcgagttcatggac
atctcgcccaagcagatcgtgtccgtggccgccgcgctgatcccgttcctggagcacgac
gacgccaaccgcgcgctgatgggctccaacatgcagcgccaggccgtgccctgcctgcgt
gccgagaccgccgtggtggggaccggcatcgagcgcaccgtggccatcgactccggttcc
tccatcgtcgcccgccgtggcggcgtggtggactccgtggacgccgcccgcatcgtggtg
cgcgtcaatgacgatgagaccgaggctggcgagccgggcgtggacatctacaacctgacc
aagtacacccgctccaaccagaacacctgcatcaaccagcgtccgctggtgaacgtgggg
gacgtgctggcccggggcgacgtgctggccgacggttcctccacggatctgggcgagatg
gccctggggcagaacatgatggtcgccttcatgccctggaacggctacaacttcgaggac
tccatcctcatctccgaacgcgtggtgcaggaggatcgtttcacctccatccacatcgag
gagctgacctgcgtggcccgcgacaccaagctcgggccggaggagatcagcgcggacatc
ccgaacgtgtccgagagcctgctctccaagctggatgagtccggcatcgtgtacgtgggc
gccgaggtcaagcccaacgacatcctggtgggcaaggtcacgcccaagggcgagacccag
ctgaccccggaagagaagctgctgcgcgccatcttcggtgagaaggcctccgacgtgaag
gacacctccctgcgcgtgccctccggcatggaaggcactgtgatcgacgtgcgcgtgttc
acccgcgacggcgtcgacaaggacaagcgtgccctgcagatcgaggaggcggcgctggcc
gccgtgcgcaaggatctcaaggaccagctgcgcatctacgaggacgacatctacgaccgc
gtcgagaagctgctggtgggcaagctggccgccggtggccccaacaagctcaaggacggc
accaaggtcaccaagacctaccttaccgaggtgccccgcgagaagtggttcgaggtgcgc
atgcgcaccgaagaggtcaacgagcagctggagaagatggctgcatccctgaaggagcag
cacgaggccttcgagacccgcttcaaggagcagaaggaaaagctcactcagggtgacgat
ctcgcccccggcgtgctgaagatggtcaaggtctacctggccgtgaagcgccgcatgcag
cccggcgacaagatggccggccgccacggtaacaagggtgtggtctccatgatcgtgccc
gtggaagacatgccgtatctggaagacggcacccccgtggacatcgtgctcaacccgctc
ggcgtgccttcccgtatgaacgtgggtcaggtgctcgagacccatctgggctgggccgcc
aagggtctgggccagaagatcggccgcatggtcgaggccaaggccaagatcgacgaactg
cgcaagttcctcgacaagatctacaaccacagtgccaagaaggtggatctgtccgatttc
agcgacgaggagatcctcaagctgtgcgccaacctgaagaagggcgtgcccatggcgacc
ccggtgttcgacggtgccgaggaagaagagatcaaggccatgctgaagctggccgatctg
cccgagagcggtcagaccaccctgttcgacggtcgtaccggcgagtccttcgaccgtccc
gtgaccgtgggttacatgcacatgctcaagctcaaccacctggtggatgacaagatgcat
gcccgttccaccggtccgtacagcctggtgacccagcagccgctgggtggtaaggcgcag
ttcggtggtcagcgcttcggcgagatggaggtctgggcgctggaggcctatggcgccgcc
tacaccctgcaggagatgctcacggtgaagtccgacgacgttcagggccgcaacaagatg
tacaagaacatcgtcgacggcgaccaccggatggaggcgaacattccggagtccttcaac
gtgctgatgaaggaaatccgttcgctggccatcaacatcgagctggaacaggactaa
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