Thioalkalivibrio sulfidiphilus: Tgr7_3316
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Entry
Tgr7_3316 CDS
T00840
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
tgr
Thioalkalivibrio sulfidiphilus
Brite
KEGG Orthology (KO) [BR:
tgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgr03016
]
Tgr7_3316
03036 Chromosome and associated proteins [BR:
tgr03036
]
Tgr7_3316
Transfer RNA biogenesis [BR:
tgr03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Tgr7_3316
Prokaryotic type
Tgr7_3316
Chromosome and associated proteins [BR:
tgr03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Tgr7_3316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
FAD_binding_2
Pyr_redox_2
HI0933_like
AlaDh_PNT_C
Pyr_redox_3
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
ACL74383
UniProt:
B8GRC9
LinkDB
All DBs
Position
complement(3458615..3460534)
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AA seq
639 aa
AA seq
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MGFEASYDVIVVGGGHAGTEAALASARAGARTLLLTHNIETIGQMSCNPAIGGIGKGHLV
KEIDALGGLMARAADRGGIHFRTLNSRKGPAVRATRAQADRVRYKAAVRSVVENTPHLFL
FQQAVDDLIVEGERVAGVITQTGLRFRSPAVVLTVGTFLGGRIHVGEVQHAGGRAGDPPS
IALAARLRELAPRVGRLKTGTPPRIDGRSIDYAQLTEQPGDAPRPVFSFIGARDEHPPQV
SCWIARTTEHTHAIIRGALHRSPMYSGAIEGVGPRYCPSIEDKVVRFADKDSHQVFIEPE
GLDTHEVYPNGISTSLPFDVQFELVRSIPGFEQAHITRPGYAIEYDYFDPRDLKPSLETR
CLAGLFFAGQINGTTGYEEAAAQGLVAGLNAARSVRDLAPWCPRRDEAYIGVLIDDLITR
GTAEPYRMFTSRAEYRLMLREDNADLRLTPLGRDMGLVDDARWAAFCTKREAVERETQRL
AATRLDPERVDREAAERVIGGAFSREQNLLDLLRRPEVDYAALMGLEGAGPGVEDPRVAE
QVEIGAKYAGYIQRQQDEVARQQRHENLALPEGLDYAAITGLSMEVRQKLAAHRPHTLGQ
AARIPGVTPAAVSLLLVHVKRQGGNGPQSPRPDDGRARA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgaagcaagctatgacgtgatcgtggtcggcggcggccacgccgggaccgag
gcggcactcgcctcggcgcgggcgggcgcgcgtaccttgctgctcacccacaacatcgag
accatcggccagatgagctgtaacccggccatcggcggcatcggcaagggacacctggtc
aaggagatcgatgccctgggcggactcatggcccgggcggcggaccggggcggcatccat
ttccgcaccctcaacagccgcaaggggccggcggtgcgcgccacccgcgcccaggcggac
cgggtacgctacaaggccgctgttcgatccgtggtggagaacacgccgcacctgttcctg
ttccagcaggcggtggatgacctgatcgtggaaggcgaacgggtcgcgggcgtcatcacc
cagaccgggttgcgctttcgctcccctgccgtggtgctcaccgtgggcaccttcctgggc
ggacgcatccacgtgggcgaggtccagcatgccggaggacgtgccggcgatccgccgtcc
atcgccctggccgcgcgcctgcgggaactggccccccgggtgggtcggctcaagaccggc
accccgccgcgcatcgatgggcgcagcatcgattatgcacagctcaccgaacagcccggc
gacgcgccacgcccggtgttctccttcatcggcgcccgggacgagcatccgccgcaggtg
agctgctggatcgcgcgcaccaccgagcacacccacgccatcatccgcggcgccctgcat
cgctcgcccatgtacagcggcgccatcgagggggtggggccgcgctactgcccgtccatc
gaggacaaggtggtgcgctttgccgacaaggacagccaccaggtgttcatcgagcccgag
ggcctggacacccacgaggtctaccccaacgggatctccaccagcctgcccttcgacgtg
cagttcgagctggtgcgctccatccccggcttcgagcaggcgcacatcacgcgccccggc
tatgccatcgagtacgactacttcgatccccgggatctaaagcccagtctcgagacccgc
tgcctcgccggcctcttcttcgccggccagatcaacggcaccaccggttacgaggaggcc
gccgcccagggcctggtggcggggctcaacgcggcgcgcagcgtgcgcgatctggccccc
tggtgcccgcgccgggacgaggcctacatcggcgtgctcatcgacgacctgatcacccgc
ggcaccgccgagccctaccgcatgttcaccagccgcgccgagtaccggctcatgctgcgc
gaggacaacgcggacctgcgcctcacccccctgggccgggacatgggcctggtggacgac
gcgcgctgggccgccttctgcaccaagcgcgaggcggtggagcgggagacgcagcggctc
gccgccacccgcctggatccggagcgcgtggaccgggaggccgccgagcgggtgatcggc
ggagccttcagccgcgagcagaacctgctggatctgctgcgccggccggaagtggactat
gccgcgctcatgggcctggaaggggccggtcccggtgtggaggacccccgggtggcggag
caggtggagatcggcgcgaaatacgccggttacatccagcgccagcaggacgaggtggcc
cgccagcagcgccacgagaacctggctctgcccgagggcctggattacgccgccatcacc
ggcctgtccatggaggtgcgccagaagctcgccgcccaccggccccacactctgggccag
gcggcgcgcatccccggcgtgaccccggcggccgtgtccctgctgctggtgcacgtcaag
cgccaggggggcaacgggccgcagtcaccccggcccgatgacggccgcgcccgggcgtga
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