Tinamus guttatus (white-throated tinamou): 104565741
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Entry
104565741 CDS
T08560
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt03440
Homologous recombination
tgt03450
Non-homologous end-joining
tgt04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104565741 (RAD50)
03450 Non-homologous end-joining
104565741 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
104565741 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tgt03032
]
104565741 (RAD50)
03400 DNA repair and recombination proteins [BR:
tgt03400
]
104565741 (RAD50)
DNA replication proteins [BR:
tgt03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
104565741 (RAD50)
DNA repair and recombination proteins [BR:
tgt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
104565741 (RAD50)
BRCA1-C complex
104565741 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
104565741 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_21
Rad50_zn_hook
SbcC_Walker_B
AAA_15
SMC_N
NPV_P10
AAA_29
Motif
Other DBs
NCBI-GeneID:
104565741
NCBI-ProteinID:
XP_010210760
UniProt:
A0A099YQH8
LinkDB
All DBs
Position
Unknown
AA seq
1315 aa
AA seq
DB search
MSKIEKMSILGVRSFGVEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNSFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKGKKTEFKTLESVITR
TKHGEKVSLSSKCAEIDREMISALGVSKSVINNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQSMKVKECQTELKYLKQNKEKAREIQDQLSNREAQLAASKEN
VKAIESQLDPLTSSLAAIEQNLMKVIRLDNDIKALESRKKQMEKDNQDLQQKMEKIFQGT
DEQLRDRYQNHQRTVKEKEKRLLDCKRELDRASKECQRFNSEKSELLIERGRLQLQADRH
QEHLTMRDSLIQSLAAQLDLDGFERAPFNEGQITTFHRLLKERQERDIEAANQLMRAFAQ
KEAMKQKLIDEIRDKKTGLERTIDLKSDIQNKKQVELKNVKYELQQLEGSPDRILELDQE
LVKAERDLEKAEKNSNVEALEQEVRSLQSEKTNLDRALRKLDQEMEQLNLHTTTITQMEM
LKKDKAEKEEQIRKVKLRHSEELTLLLGYFPNKKQLEDWLHDKNKEINQTRDKIAKLNKE
LASAEQHKNHISVELRKKEEQLSNYEAKLFDVCGSQDFDSDLNKLQEEIEKNSKQRAVLA
GATAVYSQFITQLTEETEENKSCCPVCKRAFEKEAELQDVISDLQSKLRLVPDKLKSTES
ELKKREKKRDEMIGLKPVRQTITELQETEIPGLRNKLQSVNRDFTRLKIEIEEQETVLHA
VLSEEDSAKACLQDITLMERYQTDIRDLERKIAQQAAKLLGVDLSRTVLQVSQEKQEKKH
LWDTVTGKIELNQKLKQDQQNQIQQLKSTVNELKAEKLQISSSMQRRRQLEEQTVDLTTE
VQSLHREIKEAKEQVFPLNATLEKLQQEKEDLINKKNASNKEEQEKINDIKEKVKSINNY
MKEIDNYIRHGKDDYKKQKESELEEVNSQLAACEKQKEKISKEMEMIRQDIDTQKIQERW
LEDNLTLRKRNEELKEVEDEIKRLTKEKGEMKVLQMKNEQKRLEEKIEDLKRNHHVALGR
QRGFEEEIVRFKKELRESQFKDAEEKYREMMIVMRTTELVNKDLDIYYKALDKAIMTFHS
MKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADESVSASDKRRSYNYRVVMIKGDTALDM
RGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRS
QQRNFQLLVITHDEDFVELLGRSEYVETFYRIKKNIDQCSEIMKCSINSLGSYVH
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagattgagaaaatgagtatccttggagtgaggagttttggagtggaggataaa
gacaagcaaattattactttcttcagtccattgactattttggtgggaccgaatggtgca
ggaaaaacgactattattgaatgccttaaatatatatgcactggagattttcctcccgga
acgaaaggaaactcatttgttcatgacccaaaggttgccaatgaaacagatgttagagct
cagattcgactgcagtttcgagatgttaatggcgaacttgtggctgtccagcgatccatg
gtttgtacccagaaaggcaagaaaacagaatttaaaacactggaaagtgtcattactaga
acaaagcatggcgagaaggtcagtcttagctccaagtgtgcagaaattgatcgagagatg
atcagtgcccttggtgtctccaagtccgtcattaacaacgtcattttctgtcaccaagaa
gaatccaactggcccttaagtgaagggaaggctctgaaacaaaaatttgatgagatcttt
tcagcaacaaggtatattaaagcactcgaaactctccgtcaggttcgactgaagcaaagc
atgaaagtaaaagagtgtcaaacagaattgaaatatctaaagcagaataaagaaaaagca
cgtgaaatccaggatcagcttagcaatagggaagctcagctggctgcttctaaggagaat
gtaaaagcaattgaaagtcaacttgatccactaacgagttctctggcagcaattgaacag
aatctcatgaaggtgatcagactagacaatgacataaaagccctggagagcaggaagaag
cagatggaaaaagataatcaagatctgcaacagaaaatggaaaagatttttcaaggaaca
gatgaacaacttcgggatagatatcagaaccaccagaggacggtgaaggagaaggagaag
agattattagattgtaaacgagaactagacagagcctctaaagagtgccaaagatttaac
agtgagaagtcggaattacttattgaaagaggtcgccttcagctgcaagcagatcgtcac
caagaacacctcacaatgagggattcgttaattcagtctttggcagcacagctggattta
gatggttttgagcgagcaccttttaatgaaggacagattaccacttttcataggctgttg
aaggagagacaggaaagagacatagaagctgcaaatcaattaatgagagcctttgcacag
aaagaagcaatgaaacaaaagctgatagatgaaataagagataagaagacgggattagaa
agaaccattgacctgaaatcagatattcaaaataagaaacaggttgaattgaagaatgta
aaatatgaattgcagcagttggaggggtctccagacagaattctggagttggaccaggag
cttgtcaaggcggaacgtgatctggagaaggctgagaagaacagtaatgtagaagcactc
gagcaggaagtcagaagtctgcaaagtgaaaaaacaaacctggacagagcccttcggaag
ctggatcaggagatggaacagttaaacctacacacaacaacaataacccaaatggagatg
ctgaagaaagacaaagcagagaaagaggaacaaattagaaaagtaaaactaagacattct
gaggagttgacattactgctgggatacttcccaaataaaaaacaacttgaagattggctt
catgacaaaaacaaagagattaatcagacaagggataaaattgccaaactgaacaaggaa
ttggcttcagcagaacaacataaaaatcatatcagcgttgaactaagaaaaaaggaagaa
cagttgtcaaattatgaagcaaaactttttgatgtttgtggaagccaagattttgacagt
gatctgaacaaacttcaagaagaaattgaaaagaattcaaaacaacgagctgtacttgct
ggagccacagcagtttattcccagttcattacacaactgacagaagagacagaagagaac
aagtcatgttgtccagtttgcaaaagggcctttgaaaaggaagcagaactgcaagatgta
attagtgatctgcagtctaagctgcgtcttgttccagacaagctgaagtcaacggagtct
gagcttaaaaaaagagagaagaaacgagatgaaatgataggacttaaaccagttaggcaa
actataactgaactccaggaaaccgaaataccaggcttgaggaacaagctacagagtgtc
aacagggattttacacgcttaaaaattgagatagaagaacaggaaacagtcttacatgca
gttctgtctgaggaagacagtgccaaggcatgtttacaggacatcacacttatggaaagg
taccagaccgatattagggatcttgaaagaaaaattgctcagcaggctgctaagctacta
ggagttgatttaagtagaactgttctacaagtaagccaagaaaaacaagaaaaaaaacac
ttgtgggatacagttactggtaaaattgagctaaatcaaaaacttaagcaagaccagcaa
aatcagatccaacagctgaagagcacagttaacgaactgaaagcagagaaacttcagatt
tccagcagtatgcagcgtcggcggcagctggaggagcaaacagtggatttaacaactgag
gttcagtccttacatagagagatcaaggaagcaaaagaacaggtttttcctttgaatgca
actctagaaaaactgcagcaggagaaggaggacctaattaataaaaagaatgcgagcaat
aaggaggaacaagaaaagataaatgatataaaagagaaagttaaaagtataaacaactac
atgaaagaaatcgacaactatattcgacatggaaaagacgactataaaaagcaaaaggaa
tctgaactcgaggaagtaaattctcagttagctgcctgtgagaaacagaaggaaaagata
agtaaagagatggaaatgattcgacaagatattgatacccaaaagatacaagagagatgg
ctagaggataatcttactttgaggaaaagaaatgaagaactaaaagaagttgaagatgaa
ataaaacgacttacaaaagagaagggagaaatgaaagtcctgcagatgaaaaatgaacag
aaacgtttagaggagaaaatagaagatctaaagagaaaccatcatgttgcacttggccgg
cagcgtggatttgaggaagagattgttcgttttaaaaaggagcttcgagaatcacaattc
aaagatgcagaggaaaaatatagggaaatgatgattgttatgaggacaacagagctggtg
aacaaagatctggacatttattataaggctcttgacaaagcaataatgacatttcatagc
atgaaaatggaagaaatcaacaaaataattcgtgatctttggcgaagcacctacagaggg
caagatatcgagtatatagaaattcgttctgatgcagacgagagtgtttcagcatctgat
aaaagaagaagctacaactacagagtggtaatgataaaaggagacacagcgctggatatg
cgaggaagatgcagtgctgggcagaaggtgcttgcttctcttattattcgtcttgctcta
gcagaaacattctgtctcaactgtggcatcctggcactagatgagccaactaccaacctc
gaccgagaaaacatagagtctcttgcccatgccttggtggagataataaagagccgatcg
cagcagcgcaactttcagcttctggtgataactcacgatgaagattttgttgaacttctg
ggccgatctgaatatgtggaaacattctacaggataaagaagaacattgaccagtgctct
gaaattatgaagtgcagcatcaactccttaggttcatatgttcattag
DBGET
integrated database retrieval system
