Taeniopygia guttata (zebra finch): 100217927
Help
Entry
100217927 CDS
T01082
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X4
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tgu04040
]
100217927 (SCN2A)
Ion channels [BR:
tgu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100217927 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQCJ-SCHIP1
IQ
ATP-synt_B
Neur_chan_memb
HB_ELP1
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
100217927
NCBI-ProteinID:
XP_002197631
Ensembl:
ENSTGUG00000007152
LinkDB
All DBs
Position
7:12835895..12911248
Genome browser
AA seq
2007 aa
AA seq
DB search
MAQSVLVPPGPDSFRYFTRESLAAIEQRINEEKAKKSKQERKDDDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFETTVISIFNSSI
GENGTFINATMTTFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAAADSRDYSGVGGI
GGFSESSSEASKLSSKSAKERRNRRKKKKQKEQSEGEEKDGEEFHKSESEDSIKKKGFRF
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHS
TFEDNESRRDSLFVPHRHGERRNSNISQASRSSRTVPALPANGKMHSTVDCNGVVSLVGG
PPALTSPTGQLLPEGTTTETDLRKRHSSSYHVPMDYLTDPSARQRAMSIASMLTNTMEEL
EESRQKCPPCWYKFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAM
EHYPMTEQFSGVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMEL
GLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVV
GMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTM
CLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGIDYVK
RKVREFIQKAFVRKQKVLDEIKPLEDLNNKKDSCISNHTIVDIGKNLAYLKDGNGTTSGI
GSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDLEESKEKLNAS
SSSEGSTVDVGLPPEGEQPEAEPEEVLEPEACFTEGCVRRFKCCQVSVEEGKGKIWWNLR
KTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEML
LKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALS
RFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTTDERFDIS
QINNFSQCEELIQNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVL
DQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVTMMVETDDQSED
MENILYWINLVFIVLFTGEFVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFG
MSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDPHKDHP
GSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMF
YEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDIL
FAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSAVIIQRAYRR
HLLRQKVKKVSCIFSQDKGKEEDDLPMKEDMIMDKLNENSTPEKTDMTPSTTSPPSYDSV
TKPDKDKYEKDKSEKEDKGKDSRESKK
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacccgacagcttccgctacttcacaagagag
tcgcttgcagctattgaacagcgtatcaatgaagagaaagctaaaaaatccaaacaagag
cgcaaagatgatgatgatgaagatggcccgaagccaaacagtgacttggaggcaggaaag
acactgccatttatttatggtgacatacctccaggaatggtgtccgagcccttggaagac
ctggacccatattatatcaataaaaaaacctttatagtattaaataaagggaaggcaata
ttccgattcagtgccacctctgccctgtacatgttaactcctttcaatcctcttagaaaa
atagctattaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgcgtatttatgaccatgagtaaccctccagactggacaaagaatgtagaatac
acattcactggaatttatacctttgaatcacttattaaaattcttgcaaggggcttctgt
ttagaagattttacatttctccgtgacccatggaattggctagatttcactgtcattaca
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcctgaaaactattgtaggagcc
ctgattcagtctgtgaagaagctctcggatgtgatgatcctgactgtgttttgtctgagt
gtatttgcactgatagggctgcagctgttcatgggcaacctgaggaataaatgcctgcag
tggcctccagacaattctacttttgaaacaactgttatttccatctttaatagctccata
ggtgaaaatggtacatttattaatgcaacaatgacaacatttaactgggatgaatacatc
gaagacaaaagtcatttctacttcttggaaggacaaaatgatgcgctgctatgtggcaat
agctcagatgcaggtcaatgtccagaaggatatatatgtgtgaaagctggtagaaacccc
aactatggctacacaagttttgatacattcagttgggcattcttgtcactgtttcgattg
atgactcaggacttttgggagaatctttaccagctgactctgcgtgctgctgggaagaca
tacatgatattttttgttttggtcattttcctgggttctttctacctgataaacttgatc
ctggctgtggttgccatggcctatgaagaacagaatcaagcaacaatggaagaagctgag
cagaaagaggcagaatttcagcaaatgctggaacaactgaaaaagcaacaggaagaagct
caggcggcggcggcagctgcagcagctgactcaagagattatagtggagtaggtggaata
ggtggattctccgaaagttcttctgaggcatcaaaactgagctcaaagagtgctaaagag
agaaggaatagaagaaagaaaaaaaagcaaaaagaacagtctgaaggcgaggagaaggat
ggggaagaatttcacaaatctgaatcagaggacagcatcaaaaagaaaggtttccgattt
tccattgaggggaatagactgacatatgaaaagagattctcttccccacaccagtctttg
ctgagcattcgtggctccctgttttccccaaggcgcaacagcagaacgagtcttttcagc
ttcagaggtcgagcaaaggatgtaggatcagaaaatgactttgctgatgatgagcacagc
acttttgaagacaatgagagcagaagagattctctctttgttcctcatagacatggagaa
agacgcaacagtaacattagccaggccagtaggtcatccagaacagtacctgcacttcca
gcaaacgggaagatgcacagcactgtggactgcaatggagtggtttccttggttggtggg
ccgccagctttgacatcacctacaggacagcttctgccagagggcactactacagaaact
gacttaagaaagagacactctagttcttaccatgttcctatggactacctaacagaccca
agtgcaaggcaaagagcaatgagtatagccagcatgcttacaaacacaatggaagaactg
gaagaatccagacagaaatgtccgccatgctggtataaatttgctaacacttgcttgatt
tgggactgctgtactccctggctgaaagtcaaacatattgtaaatttgattgtgatggac
ccatttgttgatctggccattaccatctgcattgtcctgaacaccctgttcatggccatg
gaacactacccaatgacagaacagtttagtggtgtgctttcagtaggaaaccttgtgttt
actggaattttcacagcagaaatgtttctcaagataattgccatggatccttattattat
ttccaagagggctggaatatttttgatggctttattgtgagtcttagtttaatggaactt
ggccttgcaaatgtagaaggattatctgtccttcgatcgttccgattgcttcgagttttc
aaattggcaaaatcttggccaactctaaatatgctgattaagattattggcaactcagtg
ggggctctggggaatctgaccctggtgctggccatcattgtgttcatttttgctgtggtt
gggatgcagctctttgggaagagctacaaggaatgtgtctgcaagatctccagtgactgt
gaacttcctcgctggcacatgcacgacttcttccactctttcctgattgtattccgagtg
ctgtgtggagaatggatagaaaccatgtgggactgcatggaggttgcaggccaaaccatg
tgccttacagtcttcatgatggtcatggtgattggaaacctagtggtactcaacctattt
ctggccttgctgctgagctcatttagttcagacaaccttgctgctaccgatgatgataat
gaaatgaacaatctccagattgctgtggcaaggattcagaaaggcatagattatgtgaag
agaaaagtgcgtgaattcatccaaaaagcttttgttagaaaacagaaagttttagatgaa
atcaaacctcttgaagacctaaacaataaaaaagacagctgtatttccaaccatacaata
gtagacataggtaaaaaccttgcctatctcaaagatgggaatggaactaccagtggcata
ggcagcagtgtggaaaaatatgttgttgatgaaagtgattacatgtcattcataaacaac
ccaagtctcaccgtgacagtgcccattgctgttggagaatcagattttgaaaatttaaac
acagaggagttcagcagtgaatcagacctggaagaaagcaaagagaaattgaatgcatcc
agttcatcagaaggcagcacagttgatgttggactacctccagaaggtgaacagccagaa
gcagaacctgaagaagttctagagccagaagcttgttttacagaagggtgtgtacggaga
ttcaaatgctgtcaagtcagtgtagaagaaggaaaggggaaaatctggtggaatcttagg
aaaacctgctataagattgttgaacacaactggtttgagaccttcatagtcttcatgatt
cttctcagcagcggtgctctggcatttgaagatatctacatagagcaacgtaaaactatc
aagaccatgctggaatatgctgacaaagttttcacctatatcttcatcctggaaatgctt
ttaaaatgggttgcttatggctttcaaacctatttcactaatgcatggtgctggctggac
ttcctgattgttgatgtctctttggttagcttaacagctaatgccttgggctactcagaa
cttggtgcgattaaatcccttaggacactaagagctttgagacctctaagagccttgtcg
cgatttgaagggatgagggttgtggtgaatgccctgttaggagcaattccctctataatg
aatgtgcttcttgtttgccttatattctggctgatatttagtatcatgggagtaaatcta
tttgctggaaagttttactactgtgttaacactacaactgacgagagatttgatatcagc
caaattaacaacttcagtcaatgtgaggagctcatacaaaacaatgaaactgcccggtgg
aagaatgtgaaggttaactttgacaatgtaggccttggatacctttctctgctccaagtg
gctacatttaaaggatggatggatatcatgtacgcagctgtggattctcgtaatgttttg
gatcagccaaagtatgaagataacctgtacatgtatctttactttgtcatctttatcatc
tttggatcattttttaccttgaacctttttatcggtgtcatcatagacaatttcaaccag
cagaaaaagaagtttggaggtcaagacatctttatgacagaagaacagaagaaatactac
aatgcaatgaaaaaattgggttcaaagaaaccacaaaagcctatacctcgaccagcaaac
aaattccaaggcatggtctttgattttgtaacaaaacaagcatttgatatcagtatcatg
atacttatctgccttaacatggtcacaatgatggtagaaacagatgatcagagtgaagac
atggaaaacattttatattggattaacctggtgtttattgtccttttcactggagaattt
gtcctgaaattgatttcacttcgtcattactactttactataggttggaatatttttgat
tttgtggttgtcattctctccatagtaggtatgtttttggctgagatgatcgagaagtac
tttgtatctcccacactattcagagtcatccggcttgccagaatcggtcgaatcctgcgc
ctcattaaaggcgctaagggaatccgcactctgctcttcgctttgatgatgtctcttcct
gctctgttcaacattgggctgctgctcttcctggtcatgttcatctatgcgatatttggc
atgtccaactttgcctatgtcaagagggaagttgggattgatgacatgttcaactttgaa
acgtttggcaacagcatgatctgcctgtttcagatcaccacctccgctggctgggacggt
ttgctcgccccaattctcaacagtggggagccagactgtgacccccataaagatcatcca
gggagctctgtgaaaggtgactgtggcaacccttctgttgggattttcttctttgtcagc
tacattatcatatccttcctggtagtggtgaacatgtacattgctgtgattttggagaac
ttcagtgttgctactgaagaaagtgctgaacctttgagcgaggatgactttgagatgttc
tatgaagtctgggagaagtttgatcccgatgcaacacaattcatagagttcagtaaatta
tcagattttgcagcttcattagatccacctcttctcatagcaaaaccaaacaaagtccag
ctgattgcaatggatctgcccatggtgagtggtgacagaattcactgccttgacatcttg
tttgctttcacaaagcgtgttttgggggaaagtggggagatggatgccctcagaatacag
atggaagatcggtttatggcagccaatccttccaaagtctcctatgaaccaattacaacc
acactgaaacgaaagcaggaggaggtgtccgctgtcatcattcagcgcgcttacagacgt
cacctcttaaggcaaaaagtcaaaaaagtatcatgtatatttagtcaggataaaggtaaa
gaggaagatgatctgcccatgaaagaagatatgattatggataaactaaatgagaactcc
actccagaaaaaacagacatgaccccatccacaacctccccaccttcttatgacagtgta
acaaagccagacaaggataaatatgaaaaagacaagtcagaaaaagaagataaaggtaaa
gacagcagggaaagtaaaaagtaa
DBGET
integrated database retrieval system
