Taeniopygia guttata (zebra finch): 100218132
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Entry
100218132 CDS
T01082
Symbol
NPNT
Name
(RefSeq) nephronectin isoform X2
KO
K06824
nephronectin
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04512
ECM-receptor interaction
tgu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100218132 (NPNT)
04518 Integrin signaling
100218132 (NPNT)
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Motif
Pfam:
EGF_CA
cEGF
MAM
FXa_inhibition
EGF_3
EGF_PEAR1L
EGF_MSP1_1
EGF
EGF_DL_JAG
Plasmod_Pvs28
JAG1-like_EGF2
EGF_2
C_tripleX
hEGF
Motif
Other DBs
NCBI-GeneID:
100218132
NCBI-ProteinID:
XP_030127473
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Position
4:complement(47293001..47341562)
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AA seq
559 aa
AA seq
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MELSLRLLLASCLSLGAAGEFDRRWPRHMVSSAGLCRFGSRIDCCWGWARVAWGQCQPIC
QPGCKHGECIGPNKCKCHPGYTGKTCNQDLNECGLKPRPCKHRCMNTYGSYKCYCLNGYM
LMPDGTCSNALSCLMANCQYGCDVLKGEVRCRCPSPGLQLGPDGRTCVDIDECATGRVLC
PRFRHCVNTFGSYICRCHKGFDLMYIGGKYQCHDIDECSLGHHQCGSFSHCYNTPGSYKC
ICKEGYRDNGTNCIQRPVTRPTVHPTTGLTARPTPGPTTRPTPGPTQLAPRTTRLTPKPT
TRYVPVTTRPVTTPVVKPPPPTTPQPTTVRPTLAPQRTPLVTTEEPSRVPIETTSSQGVI
DDNRIQPDPQKPRGDVFIPRQPGVSNNLFEILEIERGITADEFEANDDPGVLVHSCDFDS
GLCGWIRDKDDDLHWEPVRDVSGGQYLTISDPKGKEGGVAHLILPLGHLAQAGDLCLSFR
HKVPGLHSGTLQVFVRKTGAHGPAVWGRNGGHGWRQTHITLRGVGIKSVIFRGEKGKGRT
GDIGLDDVVLRRGRCSEEH
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggagctctccctgcggctgctcctggcgtcctgcctctcgctgggggcggccggggaa
tttgacagaaggtggcccagacatatggtctcttctgcaggactgtgtcggtttggaagc
agaattgactgctgctggggctgggcccgagtggcctggggacagtgccaacctatatgc
cagccagggtgcaaacatggtgaatgcattgggccaaacaagtgtaagtgccacccagga
tacactggaaaaacttgcaaccaagatctgaatgagtgtggactaaagccacggccgtgc
aagcaccggtgtatgaacacctacggcagctacaagtgctactgcctgaacggctacatg
ctaatgccagacggaacgtgctcaaatgccctttcttgcctgatggcaaactgtcagtat
ggctgtgatgtgctgaaaggggaggtgcgctgccgctgtccttctccagggctgcagctt
gggcctgatggcaggacttgtgtggatattgatgaatgtgctactgggagggttctctgc
ccacgatttaggcactgcgtcaataccttcgggagctacatttgcaggtgtcataaaggc
tttgatctgatgtacattggaggcaaataccagtgccatgatatagatgaatgttccctt
ggccaccaccagtgtggtagtttttcacattgctacaacactccaggatcctacaaatgc
atatgtaaagaagggtacagagacaatggaacaaactgcatacaaaggccagtgaccagg
ccaacagttcatccgacaactgggctgacagctcgtcccacacctgggccaacaactcgt
cctacacctgggccaactcaacttgcacccaggacaactcgactgacacccaagccaacc
acgagatacgtgccagtgacaacaaggccggtcacgacaccagtggtgaagcctccacct
ccaacaacacctcagcctacaacagtaagacctacactagcaccacaaagaactcctctg
gtaacaactgaagagccttcacgtgttcccattgaaactacatcttcccaaggagttata
gatgacaacaggatccagccagatcctcagaaaccccgtggagatgtgttcattccacgc
cagcctggagtgagcaataatctgtttgaaatacttgaaattgaaagagggattacagct
gatgaatttgaagcaaacgatgacccaggtgtgctggtgcacagctgtgattttgacagt
ggactgtgtggatggatcagggacaaagatgatgacttgcactgggaaccagtgagagat
gtatcaggggggcagtaccttaccatctctgatcccaagggcaaagaaggaggagtagca
catcttatcctgccgttgggtcacctggctcaggctggagatttgtgcctgtcctttagg
cataaggtacctgggctgcattctggtaccctgcaagtctttgtaaggaaaactggtgct
catggcccagctgtttggggaagaaatggtggccatggctggagacagacacacataacg
ttacgaggcgtaggcatcaagagcgttattttcagaggtgagaaagggaaaggaagaact
ggggatattggactagatgatgtggtcctgaggagaggacgctgctctgaagagcattag
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