Taeniopygia guttata (zebra finch): 100219531
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Entry
100219531 CDS
T01082
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100219531 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100219531 (TTC37)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
100219531 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_16
TPR_12
TPR_11
TPR_8
TPR_CcmH_CycH
TPR_17
TPR_9
ANAPC3
ARM_TT21_C
TPR_15
BTAD
TPR_5
Fis1_TPR_C
TPR_30
Retrotran_gag_2
TolB_N
TPR-S
Motif
Other DBs
NCBI-GeneID:
100219531
NCBI-ProteinID:
XP_030113904
LinkDB
All DBs
Position
Z:15648593..15708569
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKNARDAIRNKQYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKSNQTDVKGDLADVYQKLLELYESGDKQKWCDVCN
KLVELYHQEKKYLEVAETWQKLIRMKQEEGAEKAELHHLWKKMIQLLKDSTKNQDNKTGQ
LLLTAFEHALHSADPVPGEDHQNLYKDFIQCLSKFPHEVARLEKACHDMMALYPTMSYPL
EVLCLHFVQSGTLSEKALHCFSRLLEMDASSGPGIICFGIKCLKENKYKEAVKSLTEGLQ
KTNQCPAAWWYLAEAQMKIHEYRNAVLSCNQALEALGTPESPNLPWKNLALQLKAETLIK
IADADAAEEAIKALEQITDGSSDPVISALRGQAYLNKGLMNQASKISQELLLSHPDVAEA
HALEGFIHYSQKNYEQAEKSFLNAIERKAGTAEYHQYLGLTYWFMSDDTKKDKGKALTQF
LKAAKLDSYLGSAFYYLGNYYRDIAGDKSRARGCYKKAFELDETDEESGTAAVSLSVELG
DMDTALSILNEVTEKARPGTAKWAWLHRGLYYLRTGRPSQAVSDLQAALRADPKDSNCWE
SLGEAYFNRGSYSTALKSFRKASELNPGLTYSIYRAAALEQILGKYKNAIATYQQILKKT
EDYVPALKGLGECYLMLARSALDNYLDRKAVDYIEQALAYFTRAVEHRPDVSCLWKLLGD
TCTSVHVISPTKVNVQVPGSLLSKNATKQVLKKNELLILGGRCYGRALKLISLPSIWCDL
GINYYRQAEHFTAVGTDTTEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINVVAWTNLGVLYLATGNIEQAHEAFKVAQSLEPSYVLCWIGQA
LIAETVGSYDTMDLFRHTTELSMHAEGAKGYAHWVCSTLQDKDNRNTVLYLYNIVQLNAV
PAAQVVLSKYTERNPDDASAFTMFGFLNEYLHLKQQAAYAYERAASLLKNSEDTEKYNTA
MQNYGRSLCTLGRCDEAIEVYTSIPLTEFDGIVGLALAYFKKGLLEESIKAYEKALSVAE
SEEDKAHVLTALAMIEYKLNKVDAAKTLLFKCSLKEPSTESLKALCTLGLVKQDATLATA
ALKELLKHEKGDDGIYERCLIASAVYALQGRNVAVQREVSKAIHSYPDNSALWSLLSRVV
PLYASKKSKGGALAGSVAHTLDVNCRKEVLLNIAVNQLVAGCHMLEDKKNNPLKNIQKAI
HVCPDNPAAWAVLMAACHAENTVVCLNNTEPKRTGLEMTLVSTVSAKTGESNLPHNYVRT
LEDWCLCQAITSLEETGKLSEAEALCNKGLKNCPEHPALFLLLRQIQCKQLLQSHKELPD
NILEELRKTVMSSSSSAAAWQWLAKIYQSQRMMTGAEMCYRKSLQLASQQGSWNGKLSSL
LRLAMLALEICMANVPNEHWPSLVQEATTEALKLSPCPLAALLQALLQYNRKMGARETRR
MLERVVYQPANPETIVSVARWYLLQHLYAKDDCELIDVLIENAKANGDVRALELNEKLSA
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaggcagcattaaagaatgctagagacgcgatcagaaataag
cagtataaggaggccttaaaacattgcaaggcagttttgaagcaagaaaaaaacaactac
aatgcttgggtattcattggcctggcagctgctgagttagagcagcctgatcaggccaaa
ggagcatacaagaaggctattgaacttgaaccaaaccagttactggcatggcagggatta
gcaaatttgtatgagaaatccaaccaaacagatgtcaaaggagacttagcagatgtttac
caaaaactcttggaactttatgaaagtggtgacaagcagaaatggtgtgatgtatgtaac
aagcttgtggaactataccatcaagaaaagaaatatttggaggtggctgaaacttggcag
aaactaataaggatgaaacaggaggaaggtgcagaaaaggcagagcttcatcacctctgg
aagaagatgatccagttactgaaagacagtacaaagaaccaggataataagactgggcag
ttgcttttaactgcatttgaacatgcgcttcactctgctgaccctgttcctggtgaagac
caccaaaatctttacaaagacttcatacagtgcttgtcaaaatttcctcatgaagtagct
aggttggaaaaggcttgtcatgatatgatggctttgtaccctactatgagttaccctttg
gaagtactttgcttgcactttgttcagtcaggtactttgtcagaaaaggccctacactgt
ttctctaggcttttggagatggatgcaagcagtggtccaggcattatttgttttggtata
aaatgcctcaaagaaaataaatacaaggaggctgttaagagtcttactgaaggtttgcag
aagacgaaccagtgtccagcagcgtggtggtatctagcagaggcacagatgaaaatccat
gaatacagaaacgctgtcctgtcctgcaatcaagctcttgaggctcttggaactcctgag
agtcctaatcttccatggaagaaccttgcccttcagttgaaagcagagactttgattaaa
atagctgatgctgatgctgcagaagaagccattaaagcacttgagcagattacagatgga
agcagtgatccagtgatttcagctctaaggggtcaggcttatctaaacaaaggtttaatg
aatcaggcttcaaagatttcacaagagcttctcttgtcccaccctgatgtggctgaggcc
catgctttagagggtttcatccattattcccaaaagaactatgaacaggcagaaaaaagt
tttctaaatgctattgaaagaaaggctggaactgcagagtatcatcagtacctggggctc
acatactggttcatgagcgatgacacaaaaaaagacaaaggaaaagcactcactcagttc
ttgaaggctgcaaaattggacagctacttgggaagtgccttttattatctgggtaactac
tacagagacattgctggagacaaaagtagagctcgtggttgctataaaaaggcttttgaa
ctggatgagacagatgaagaatctggaacagcagctgtcagtttaagtgtggaacttgga
gacatggacactgctctgtcaatcctgaatgaggtaactgaaaaagcaagacctggtaca
gcaaaatgggcctggcttcatcgtggtctttactacttgagaactggtcggccatcacaa
gccgtgtctgatttgcaggcagctctcagggctgatccaaaggattccaactgctgggag
tctctaggggaggcttacttcaacagaggtagctactcaacagctctgaaatccttcagg
aaagcaagtgagctgaacccagggctcacatacagcatttacagagctgcagcacttgag
cagattctaggcaaatacaaaaatgctatagctacctatcaacaaatattaaagaagaca
gaagactatgtgcctgcactgaaaggacttggtgagtgttatctcatgctggcaagatca
gcccttgataactatttggataggaaggctgtggattacatagagcaggcccttgcttat
tttacaagggcagtagagcaccgtcctgatgtatcttgcctctggaaactgttaggagat
acctgtactagtgtgcatgttatttcaccaacgaaagtaaatgttcaagtaccaggatcc
cttctgagtaaaaatgcaaccaaacaggtgctgaagaaaaatgagcttctcatactggga
ggaaggtgttatggcagagctttaaaactgatatctttgcctagcatatggtgtgatctt
ggaataaattattatcgccaggcggagcactttacagcagtgggcactgacacgactgag
attagtgaactgctagaaaagtctttgcagtgtctcaaaaaagctgtgagacttgacagc
aaaaatcatctttattggaatgcacttggtgtagttgcttcttgtagtgctattgggaat
tatgctcttgcacaacattcgttcatcaaatctgttcaagctgagcaaattaatgttgtt
gcctggaccaacttgggggttttgtatctggcaactggaaacattgagcaagctcatgaa
gccttcaaggtagcccagtctctggaaccttcttacgtgttgtgttggattggacaggct
cttattgcagagactgtaggcagctatgataccatggatctcttcaggcacacaactgaa
ctcagtatgcatgctgagggagcaaaaggctatgcccactgggtatgttcaacactgcag
gataaagacaacagaaacactgtactgtatctgtacaacattgttcaacttaatgccgta
ccagcagcccaagtggtcttgagcaaatacacagaaagaaatccagatgatgcttctgct
ttcactatgtttgggtttttgaatgagtatctgcatctaaaacagcaggcagcctatgcc
tatgagagggcagcttcacttctgaaaaactcagaggatactgagaaatacaatacagca
atgcaaaactatggcaggtcactatgtactcttgggcggtgcgatgaggccattgaagtt
tacacatcaatacccctaacagagtttgatggcattgtggggttagccttagcttacttc
aagaaaggactcttagaagaaagtatcaaagcctatgaaaaagcattgtctgttgctgag
tctgaagaagataaagcacatgtcctgactgccttggcaatgatagaatataaactgaac
aaagtggatgctgcaaagactctgctgtttaaatgctcattaaaggaacctagtacagaa
agtctgaaggctttgtgcacactgggattggtaaagcaggatgcaacacttgcaacagca
gccctaaaagaattactgaagcatgaaaaaggggatgatgggatttatgagaggtgtctt
attgcgtctgctgtttatgcattgcaaggtagaaatgtggcagtccagagggaagtctcc
aaagcaatacacagttaccctgataactctgccctttggtctcttctgtctcgagtagtt
ccactgtatgcatccaaaaagtcgaaaggaggagctttggcaggaagtgtcgcacataca
cttgatgtaaactgtagaaaggaagtcctgctgaatattgcagttaatcagttggtagca
ggatgtcacatgttagaagataagaaaaacaatcctctgaaaaatattcagaaggccatc
catgtctgcccagataatcctgctgcttgggcagtgctaatggcagcctgtcatgctgaa
aacactgttgtctgtctaaacaacactgaaccgaaacgaaccggtctagagatgacactt
gtgtctacagtttcagccaaaactggagaaagtaaccttccacataattatgtccgcact
ctggaagactggtgtctgtgtcaagctataaccagtctagaggagactggtaaactgtca
gaagctgaagctctttgtaacaagggtttaaaaaactgccctgagcacccagctctgttt
ttgcttttgagacaaattcagtgtaagcagctgttgcagtctcacaaagaacttccagac
aacatcctggaggaacttcgcaagacagtcatgtccagttcatcctcagctgcagcctgg
caatggctggcgaaaatatatcagtctcagagaatgatgactggagcagagatgtgttac
agaaagagtctgcagttggcatcacagcagggcagctggaatgggaagttatctagtctg
ctcaggctagctatgctcgcactggaaatctgcatggctaatgtcccaaatgaacactgg
ccatccttggttcaggaggcaacaactgaagctttgaaactttctccttgccccttggca
gctctgcttcaagccctgctacagtataatcgcaaaatgggagcaagggagactcggcga
atgttggaaagagttgtttatcaaccagcgaatccagaaaccatagtgtcggtggcacgc
tggtacctcctgcaacatctgtatgccaaagatgattgtgaattaatagatgtgcttata
gaaaatgccaaagctaatggagatgttagagctctggaactaaatgagaaattgtcagca
agtgcctag
DBGET
integrated database retrieval system
