Taeniopygia guttata (zebra finch): 100220303
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Entry
100220303 CDS
T01082
Symbol
NEIL1
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100220303 (NEIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100220303 (NEIL1)
Enzymes [BR:
tgu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
100220303 (NEIL1)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
100220303 (NEIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
100220303
NCBI-ProteinID:
XP_030137147
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All DBs
Position
10:complement(1839139..1842820)
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AA seq
438 aa
AA seq
DB search
MAARTARAAANGSAQRAPRSQWGRAVRRAAAAAGSGCRAAAAMPECPELHLAGRFINGAC
GALVFAGAVERSAVGRGPEVPFRSEAYSISAVARGKELRLTLSALDPAAGPSAQDLVFRF
GMSGSFRLCPAAELPRHAHLRFLTRESPPRALCFVDPRRFGSWRLGDAWQPERGPCVVSE
YQAFRENVLKNLDDRAFDKPICEVLLNQKYFNGIGNYLRAEILYRLKIPPFEKARTVLEA
LKEQEQERRKKDPSLTLSKKVKLKRENADLLELCHTVPMEVITAEKQLLDPEHSDAYSNF
KKWLQCYLVPGMSSLRDRSGRTIWFQGEPGPMAPKGQRPRKTPHKKSPQLKADPEAPSPK
VTPRASKQRRRAAANPPKAEEEKEEKEEQAGQADRPRKGRARGRRAVTAAPASPEEPLSV
RRSRRTSARRGRGAAPAV
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcgcaccgcccgcgccgcagccaatggcagcgcgcagcgcgccccgcgcagc
caatgggggcgggccgtgcggcgggcggcggcggcggcgggctcgggctgcagagcggcc
gcggccatgcccgagtgcccggagctgcacctggccgggcgcttcatcaatggggcgtgc
ggagcgctggtgttcgcgggcgccgtggaacgctcggccgtgggccgcggccccgaggtg
cccttccgcagcgaggcctacagcatctcggccgtcgcccggggcaaggagctgcggctg
acgctgagcgcgctggaccccgccgccggcccctccgcgcaggacctggtgttccgcttc
ggcatgtcggggtcgttccggctgtgccccgccgccgagctgccccgccatgcccacctg
cgcttcctcacccgtgagagccccccgcgtgccctctgcttcgtcgacccccggcgcttc
gggtcctggcgcctgggggacgcctggcagccggagcgcggcccctgcgtggtgtccgag
taccaggccttcagggagaatgtgctgaagaacctggatgacagggcttttgacaagccc
atctgtgaggtcctcttaaaccagaagtatttcaatggaattgggaattacctgcgtgct
gagatcctgtacaggttgaagatccctccctttgaaaaagctcggaccgtgctggaggcc
ctgaaggagcaggagcaggagaggaggaagaaggatccttccctgacgctgagcaagaag
gtgaagctgaagcgagagaacgcagatctcctggagctgtgccacaccgtgcccatggag
gtcatcacggcagagaagcagctcttggaccccgagcactcggatgcttactccaacttt
aagaagtggctgcagtgctacttggtgcctggcatgagctccctgcgtgaccgcagtggc
aggaccatatggttccagggagagcctggccccatggctcccaaagggcagagaccccgc
aagacgccccacaagaagagcccccagctgaaggcagaccccgaggcaccgagccccaag
gtcaccccacgtgcctcgaagcagcgccgcagggctgcagcaaaccccccgaaggcagag
gaggagaaggaagagaaggaagagcaggcagggcaggctgacaggccaaggaagggacgt
gctcgtgggaggagggcagtgactgctgctccagcctcgcctgaggagcctctgagtgtc
agaagaagccgccggacgtctgcccgcaggggccgaggtgcagcccctgctgtgtga
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