Taeniopygia guttata (zebra finch): 100223856
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Entry
100223856 CDS
T01082
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
100223856 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100223856 (IRF1)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
100223856 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
SMP_MUG190-like
Motif
Other DBs
NCBI-GeneID:
100223856
NCBI-ProteinID:
XP_030139821
Ensembl:
ENSTGUG00000001375
LinkDB
All DBs
Position
13:complement(2508665..2515684)
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AA seq
315 aa
AA seq
DB search
MPVSRMRMRPWLEMQIDSNQIPGLIWINKEKRIFQIPWKHAAKHGWDMEKDACLFRSWAI
HTGRYKEGEKDPDPKTWKANFRCAMNSLPDIEEVKDKSINRGSSAVRVYRMLPPLTKHQK
KERKSKSSREVRNKSKRKCYEETMLKESAESLTSTPLPDDHSGYTIHDYAGQEVEVESTA
MTLDLSSCEVSGSLTDWRPAMEVTMADSTNDLYQLQVSPLASSSEVTDEDEEEINPDIFK
LLGSAQDWHNTSIGGKGFLTNESGTQTLCSTYSYKEQDGDIDTTSGELDFRFFDQKDFSW
LDTVRPTMQVIPCGL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtcaagaatgcgcatgaggccgtggttggaaatgcagattgattccaatcaa
ataccaggattgatatggattaacaaggagaagaggatcttccaaatcccatggaaacat
gcagctaagcatggctgggacatggagaaggatgcctgccttttccggagctgggccatt
catacaggaaggtataaagaaggtgagaaagatcctgatccaaaaacctggaaggcaaat
ttccgctgtgccatgaattccctgcctgacattgaagaagtgaaggataaaagcatcaac
aggggctccagtgctgtcagggtttacaggatgctgccacccttgacaaagcatcagaag
aaagaaaggaagtcaaagtcttcaagggaagtaagaaacaagagcaagagaaagtgttat
gaagagacaatgctgaaagagtcagcagaaagcttaaccagcactcctttgccagatgac
cacagtggctacactattcacgactatgcagggcaggaagtggaggtggagagcacagcc
atgactttggacctgtcctcctgcgaggtgagcggctccctgaccgactggaggccagcg
atggaggtcaccatggctgacagcaccaacgacctctaccagctccaggtgtctcccctg
gcttcgtcctcagaggtcacagatgaagatgaagaggaaataaacccggatatttttaag
ctgcttggctcagcccaggactggcacaacaccagcattggtgggaaaggctttctcacc
aacgagtcaggcacccagaccctgtgcagcacctacagctacaaggagcaggatggggac
atcgacacgacatcaggagagttggatttcaggttctttgaccagaaagacttctcctgg
ctggatacagtgaggccgaccatgcaagttattccctgtggactgtaa
DBGET
integrated database retrieval system
