Taeniopygia guttata (zebra finch): 100223881
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Entry
100223881 CDS
T01082
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100223881 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100223881 (SS18L1)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100223881 (SS18L1)
GBAF(ncBAF) complex
100223881 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
100223881
NCBI-ProteinID:
XP_002198777
Ensembl:
ENSTGUG00000007836
LinkDB
All DBs
Position
20:complement(10429888..10443874)
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AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNINLGPGGMSQSASNQSLHSQSNLSDAIGTGLPPSSLMQ
SQISNGPNHVSMQQSGQNTMPTTSLSMTVSSHGTGPGYSHTVPASQNVPMQGQGSIGNYV
SRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQSSIAMMSQSNQGNSMMGQRPMGP
YRASQQGSSQQYMGQEEYYSEQYSHGQGSSEPMNQQYYPDGHGDYAYQQSSYTEQSYDRS
FDDSTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPNQQSYPGQQQGYGPAQGASSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgcctttgcttctgctcgcccaagaggcaaaggggaggtcacccagcaaact
atccagaagatgctagatgaaaatcaccacctaatacaatgtattatggattatcagagc
aaggggaaaactgcagaatgtactcaataccaacaaatcttgcacagaaacctggtttac
ttggcaacaatagcagactctaaccagaatatgcagtccttgcttcctgctccaccaacg
caaaatataaacttgggcccgggagggatgagtcagagcgcatccaaccaatccctccac
tcccagagcaatctcagcgatgccatcgggaccggccttcctccctcctccctcatgcag
agtcagattagcaatggtcccaaccacgtgtctatgcagcagtcaggccagaacaccatg
cccacgacctctctgagtatgactgtcagcagccatgggactggccctggttacagccac
acagtgcctgcctctcagaacgtgcccatgcaaggccagggctccataggcaattacgtc
tctcgaacaaacatcaacatgcagtccaatccagtctccatgatgcaccagcaagcagca
acgtcacattacaactcagcacaaggagggagccagcactaccagggacagtcttccatt
gccatgatgagccagagcaaccaaggcaacagcatgatggggcagcgacccatgggccct
tacagagcttcacagcaaggttcctcgcagcagtacatgggtcaggaagaatattacagt
gagcagtacagtcatggccaaggctcatcagaacctatgaatcagcaatactatccagat
ggacatggtgattatgcctatcagcagtcatcctatactgaacagagctacgaccggtcg
tttgacgactctacacaacactactatgaaggaggaaattctcagtacagccagcagcag
gcaggataccaacagggagctgcacaacagcaaacatattcccagcagcaatacccaaat
caacagagttacccaggacaacagcaaggatatggtcctgcacaaggagcctcctcacag
tattccagctaccagcagggacaggggcagcaatatggaagttacagagcttcccagaca
ggcccatccgctcagcaacagaggccttatggctatgagcagggacaatatggaaattac
cagcaataa
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