Taeniopygia guttata (zebra finch): 100225602
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Entry
100225602 CDS
T01082
Symbol
NUP85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100225602 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgu03019
]
100225602 (NUP85)
03036 Chromosome and associated proteins [BR:
tgu03036
]
100225602 (NUP85)
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100225602 (NUP85)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100225602 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
100225602
NCBI-ProteinID:
XP_012434035
Ensembl:
ENSTGUG00000008703
LinkDB
All DBs
Position
18:complement(8911048..8922053)
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AA seq
651 aa
AA seq
DB search
MDEPDTEPPLVVVPGADPSARQLCFAWGPAEVLVCETLFGRAGTGDGAPSSSCVFVVRRD
QDIYIQTLRKLFNESHGIFMGLQRSEEELAGKSRKAQLVQVSKNYRSVIRACMEDMHQAA
VSTQDPALQGQYSTQVSILSAMELIWNLCEILFVESATAGPLLLRLLDWVRLHVCDVDSM
VREVLSSESPSKHKLFWNVVDVFVLQGRMDEARHLLSKEASANPTSMNMYKILDDLMKKM
PVPSLSNTQTLTELELKWQHWHEECQRYLQDGTFASNPHMESICKILLGDEDAILEKKEL
MTTWYHFLVTRLLYSHPTVKPLELRFYAQSSMDLFLGGESSPEPLDMILMAAFEFEMHQV
IKECSIVLSNWWFVAHLTDLLDHCKLLQSHNLYFGSNMREFLLLEYASGLFSHHSLWQLG
VDYFDHCPEYGRVYLELHIERIPLSTEQKALKVLRICEQRQMHEQVRSICKIMAMKALRN
NRLGSALSWSIRAKDAAFATLISDRFLKDYSERGCFSDLDLIDNLGPSMLLSDRLTFLGK
YREFHRLYGEKRFPEAARLLLTLMTAHIAPCSFWMTLLTDALPLLEQKEVIFSAEQTYEL
MRCLEDLTAGNPDKQKFQEDDIETTKVEMLRLALARNLARVIVKEGTVEGS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggacgagccggacacggagccgccgctggtggtggtgccgggcgcggacccttcggcc
cggcagctctgcttcgcctggggccccgcggaggtgctggtgtgcgagacgctgttcggc
cgcgcaggtaccggggatggagcaccgagctcctcctgcgtcttcgtggtccgcagggac
caggatatttacatccagaccctgcggaaactcttcaacgagtcgcacgggattttcatg
gggctgcagcggagcgaggaggagctggcggggaagtcgcggaaggcgcaattggttcaa
gtgagtaaaaactaccggtcagtgataagagcctgcatggaggacatgcaccaggctgct
gtttcgacccaggaccctgccctgcaaggccagtacagcactcaggtttccattctctct
gcaatggagctgatctggaacctttgtgagattctgtttgttgaatcagctacagctggg
cccctcctgctgcgcctgctggactgggtgcggctgcacgtgtgcgacgtggacagcatg
gtccgggaagttctgagcagtgagagtccatccaaacacaagctcttctggaacgtggtg
gatgtctttgtgctgcaaggccggatggacgaggcgcggcacctgctctccaaggaggcc
agtgccaatcccacatccatgaacatgtacaaaatcttggatgacctgatgaagaagatg
cctgtgcccagtcttagcaatacccagacactgacagagctggagctgaagtggcagcac
tggcatgaggaatgtcagcggtatctacaggatggaacttttgcttccaatccccacatg
gagtccatctgcaagatcctgctgggagatgaggatgccattttggagaagaaggagctc
atgaccacctggtaccacttcctcgtcacacggctcctgtattctcacccgacagtgaag
ccactggagctgcgtttctatgcacagtctagtatggacctgttcctgggtggagagagc
agccctgagcctctagacatgattttaatggcagcctttgaatttgagatgcatcaagtg
atcaaggaatgcagcattgtcctgagcaactggtggtttgtagctcatctgactgacctg
ttggatcactgcaaactcctgcagtctcacaatctctattttggttcaaatatgcgtgaa
tttctcctgctggagtatgcctcaggactcttctcccatcacagcctgtggcagctgggg
gtggattacttcgaccactgcccggagtacggtcgggtgtacctggagctgcacatcgag
cgcatcccgctcagcacggagcagaaggccctcaaggtgctgaggatctgtgagcagagg
cagatgcatgagcaagtgcgcagcatctgtaagatcatggccatgaaggctctgcggaac
aaccgcctgggctctgccctgtcctggagcatccgagccaaggacgcggcctttgccacc
ctcatctcggaccgattccttaaggactattctgaaagggggtgtttctctgacctggac
ctcattgacaatctgggcccatccatgctgctcagtgaccggctcacattccttgggaag
taccgggagttccaccggctctacggggagaagcggttcccggaggcggcgcggctgctg
ctgacgctgatgacggcgcacatcgctccctgctccttctggatgacgctgctgacggac
gcgctcccgctgctggagcagaaggaggtcatattttcagcagagcagacatacgagttg
atgcgatgcctggaagacctgacagccgggaatccagacaagcagaaattccaggaggat
gacattgagacaaccaaagtggaaatgctgagacttgccctcgcacggaacctcgcacga
gtcatcgtcaaagaaggcaccgtggaagggtcttga
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integrated database retrieval system
