Taeniopygia guttata (zebra finch): 100228835
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Entry
100228835 CDS
T01082
Symbol
SLC6A11
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3 isoform X1
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100228835 (SLC6A11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tgu02000
]
100228835 (SLC6A11)
Transporters [BR:
tgu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100228835 (SLC6A11)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100228835
NCBI-ProteinID:
XP_012427319
Ensembl:
ENSTGUG00000004225
UniProt:
H0Z1H5
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Position
12:17718001..17813129
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AA seq
620 aa
AA seq
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MTAEKTIPIINGKPEDALDPEASSTNLVHSNDKKVHERGHWNNKVEFVLSVAGEIIGLGN
VWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGI
GYATQVIEAHLNVYYIIILAWAIFYLFNCFTTELPWASCGHEWNTENCVEFQKLNMSNCS
QVSLQNATSPVMEFWERRVLAISDGIEHIGNLRWELALCLLAAWTICYFCIWKGTKSTGK
VVYVTATFPYIMLMILLIRGVTLPGASEGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAI
CLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAE
SGPGLAFIAYPKAVTMMPLSPLWAALFFMMLIFLGLDSQFVCVESIVTAVVDMYPKVFRR
GYRRELLILGLSIISYFLGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFECVCIGWVYG
SNRFYENIEDMIGYKPVSLIKWCWMVLTPGICAGIFIFFLVKYKPLKYNNVYIYPDWGYG
IGWMMALSSMVCIPLWICIKLWKTEGTFMEKFRKLITPSSDLKMRGKLGGGAYIAAINDC
DAKLKGDGNISTITEKETHF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaaaagactattcctataattaatggcaagccagaagatgctttggaccca
gaagcgtcaagtaccaacctcgtccacagcaatgataagaaagttcatgaaagaggtcac
tggaacaataaggttgaatttgtgctttctgtggcaggggagattattgggttgggaaac
gtctggagattcccatatctttgctacaagaatggaggaggtgctttcctcatcccctac
gtggtcttttttatttgctgtggaataccagtatttttcctggagacggccttgggacag
tttacaagtgaaggaggcatcacatgttggaggaaagtttgccctctctttgaaggcatt
ggctatgctacccaagttatagaggcacacctaaatgtatattacatcatcattttagca
tgggctatcttctacttgttcaactgctttactacagagcttccctgggcttcctgtggc
cacgaatggaatacagaaaactgtgtggaatttcaaaaactcaacatgagcaactgcagt
caagtctctttacaaaatgccacttctccagtgatggaattctgggaacgaagggtgctg
gcaatttctgatgggattgagcacattgggaatctgcgctgggagctcgccctgtgcctc
ctggctgcttggactatttgctatttctgcatctggaaaggaaccaaatccactggaaag
gttgtgtatgtgacagccacattcccctacatcatgctgatgatcctcctcatccggggg
gtgacgttacccggcgcttccgagggcatcaagttctacctttaccccgacatctcccgg
ctctccgacccccaggtgtgggtggatgctggcacacagatcttcttctcctacgccatc
tgcctgggctgcctgacagccctggggagttacaacaactacaacaacaactgctacaga
gactgcatcatgctctgctgcttgaacagtggcacaagctttgttgctggttttgctatc
ttttcagttcttggatttatggcttatgaacaaggcgtgcccattgcagaagttgcagaa
tcaggaccaggacttgcattcattgcttaccctaaagctgtcaccatgatgcctctgtct
cctctgtgggcagctctgttcttcatgatgctcatcttcctgggcttggacagccagttt
gtgtgcgtggaaagcatcgtgacagccgtggtggacatgtaccccaaggtgttccgcagg
ggctacaggagggagctgctcatcctcggcctctccatcatctcctacttcctcggcctc
atcatgttaactgagggtgggatgtatgtgtttcagctctttgactcctatgcagccagt
gggatgtgcctgctctttgtggccatatttgagtgtgtctgcataggctgggtgtacggc
agcaatcgcttttatgagaacattgaagacatgattgggtacaaacctgtgtcgttgatt
aagtggtgctggatggtcctaactccaggtatttgtgcaggaatcttcatctttttcctg
gtgaaatacaagcccctaaagtacaacaatgtgtacatctaccctgactggggctacggc
atcgggtggatgatggcactgtcctccatggtctgcatcccgctgtggatctgcatcaag
ctctggaagacagaaggcaccttcatggagaaattcaggaagttgattacacctagctca
gacctgaaaatgcggggcaagctcggaggaggagcctacattgcagcaataaatgactgc
gatgccaaactgaaaggagatggcaacatttctaccatcacagaaaaggagacacatttc
tga
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