Thermococcus sp. AM4: TAM4_692
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Entry
TAM4_692 CDS
T01638
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
tha
Thermococcus sp. AM4
Pathway
tha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TAM4_692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tha03019
]
TAM4_692
03012 Translation factors [BR:
tha03012
]
TAM4_692
Messenger RNA biogenesis [BR:
tha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
TAM4_692
Translation factors [BR:
tha03012
]
Eukaryotic type
Release factors
TAM4_692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
HypA
Wtap
GshA
zf-RRPl_C4
TssR_VWA
zinc_ribbon_6
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
EEB74747
LinkDB
All DBs
Position
14953..16233
Genome browser
AA seq
426 aa
AA seq
DB search
MPLGERIGVMLMSHKSAEMYELKKKVEELKSYRGRATELVSLYIPAGYDINKVMQQLREE
YGTAQNIKSKSTRKNVLGALERAMQHLKLYRKTPENGLALFVGNVSEQEGVSDIRLWAIV
PPEPLKVRLYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIEVIDELTSN
VPGKTRAGGQSARRYERIREQETHEFMKRIGEHANQAFLPLLEKGELRGIIIGGPGPTKE
EFVEGDYLHHELRKKIIGVVDISYHGEYGLRELVEKASDILRDHEAVKERKLIQDFFKHL
VKDTGMITYGEKEVRNALELGAVDTLLISEGYDKVRVKAKCNNCGWSEEKTMSEQEFHVY
KKKLTHCPKCGSQNITFEKWDVAEELIKMAEEAGSNVEIISLDTEEGQQFYTAFGGLGAF
LRYKIH
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcggcgagagaataggggtgatgctcatgtctcacaagtcagcggaaatgtac
gagctcaagaagaaggttgaggaactcaagagctatcgaggtcgagcgaccgaactcgtg
agcctctacatcccggcgggctacgacatcaacaaggtcatgcagcagcttcgcgaggag
tacggaacggcccagaacatcaagagcaagtccactcgaaagaacgttttaggagcgctt
gaaagggcgatgcaacacctcaagctctaccgcaaaactccggagaacggccttgccctg
ttcgttggtaacgtcagcgagcaggagggagtcagcgacataaggctctgggctatagtc
ccgccggaaccgctcaaagtccgcctctaccgctgtgaccagaccttcgtcaccgaaccg
cttgaggagatgctccgcgttaaagatgcgtacggcctcataaccgtcgagaagaacgag
gcaacgataggcctcctcaggggcaagaggattgaggtgatagacgagctcacctcgaac
gtcccgggaaagacgagggccggtggtcagtcggcgaggcgttacgagaggattcgtgag
caggagacgcacgagttcatgaagcgcatcggagagcacgccaatcaggcattcctcccg
ctccttgagaaaggtgagctgaggggaatcatcataggcggtcccggaccgaccaaggag
gagttcgttgaaggtgattacctccaccacgagctgaggaagaagattatcggtgtcgtc
gacataagctaccacggcgagtacggcctgagggagctcgttgagaaggccagcgatata
ctcagagaccatgaggcggtcaaggagaggaagcttatccaggacttcttcaagcacctc
gtcaaggacacggggatgataacctacggtgagaaggaagttagaaacgccctcgaactc
ggcgccgtggacacgctcctcatcagcgagggctacgacaaggtccgcgtcaaggccaag
tgcaacaactgtggctggagcgaggagaaaacgatgagcgagcaggagttccacgtctac
aagaagaagctgacccactgcccgaagtgtggtagtcagaacataaccttcgagaagtgg
gacgtcgcggaggagctcataaagatggcggaggaagccggctcgaacgtggagataatc
tccctcgataccgaggagggccagcagttctatacggctttcggcgggcttggagcgttc
ctgaggtacaagattcattga
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