KEGG   Thalassococcus sp. S3: CFI11_20775
Entry
CFI11_20775       CDS       T05844                                 
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
  KO
K00240  succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
Organism
thaa  Thalassococcus sp. S3
Pathway
thaa00020  Citrate cycle (TCA cycle)
thaa00190  Oxidative phosphorylation
thaa00650  Butanoate metabolism
thaa00720  Other carbon fixation pathways
thaa01100  Metabolic pathways
thaa01110  Biosynthesis of secondary metabolites
thaa01120  Microbial metabolism in diverse environments
thaa01200  Carbon metabolism
Module
thaa_M00009  Citrate cycle (TCA cycle, Krebs cycle)
thaa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
thaa_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:thaa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    CFI11_20775
   00650 Butanoate metabolism
    CFI11_20775
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    CFI11_20775
   00720 Other carbon fixation pathways
    CFI11_20775
Enzymes [BR:thaa01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     CFI11_20775
SSDB
Motif
Pfam: Fer2_3 Fer4_8 Fer4_17 Fer4_10 Fer4_9 Fer4_16 Fer2 Fer4_7 Fer4_18 Fer4_22
Other DBs
NCBI-ProteinID: QBF33629
LinkDB
Position
complement(4209885..4210664)
AA seq 259 aa
MVQLTLPKNSRIKTGKTWPKPDGATNLRKFSIYRWNPDDGENPRVDTYWVDMDTCGPMVL
DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGMDEIKGDVKIYPLPHMP
VVKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWRQSIEDRKKLDGLYECVMCASCSTAC
PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDDLEDPFKLYRCHTIMNCAKTCPKG
LNPAKAIAEIKKMMVERTV
NT seq 780 nt   +upstreamnt  +downstreamnt
atggttcaactgacactcccgaaaaactcgcgcatcaagacgggcaagacctggcccaaa
ccggacggcgcgaccaacttgcgcaaattcagcatttatcgctggaaccccgatgacggg
gagaacccccgcgtggacacctattgggtggacatggacacttgcgggccgatggttctg
gatgcgctgatcaagatcaagaacgagatcgatccgacgctgaccttccgtcgttcgtgc
cgcgaggggatttgcggatcctgcgcgatgaacatcgacgggatcaatacgctggcctgc
atctacggcatggatgagatcaagggcgacgttaagatctatccgctgccgcatatgccg
gtggtcaaggacctgatcccggatctgacgcatttctacgcgcagcacgcgtcgatcatg
ccctggcttgagaccaagacaaaccgaccggcgaaggaatggcgacagtcgatcgaggat
cgtaagaaactcgacgggctctatgaatgcgtgatgtgtgcgtcatgctcgacggcgtgt
ccctcgtattggtggaacggggatcggtatctggggccggcagctctgctgcacgcctat
cgctggattatcgacagccgggacgaagcgaccggagagcggctggatgatctggaggat
cctttcaagctttatcggtgccacacgatcatgaactgcgcgaagacctgtccaaagggg
ctgaacccggccaaggcgattgccgagatcaagaagatgatggtcgagcgcacggtctga

KEGG   Thalassococcus sp. S3: CFI11_20795
Entry
CFI11_20795       CDS       T05844                                 
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
thaa  Thalassococcus sp. S3
Pathway
thaa00020  Citrate cycle (TCA cycle)
thaa00190  Oxidative phosphorylation
thaa00650  Butanoate metabolism
thaa00720  Other carbon fixation pathways
thaa01100  Metabolic pathways
thaa01110  Biosynthesis of secondary metabolites
thaa01120  Microbial metabolism in diverse environments
thaa01200  Carbon metabolism
Module
thaa_M00009  Citrate cycle (TCA cycle, Krebs cycle)
thaa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
thaa_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:thaa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    CFI11_20795
   00650 Butanoate metabolism
    CFI11_20795
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    CFI11_20795
   00720 Other carbon fixation pathways
    CFI11_20795
Enzymes [BR:thaa01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     CFI11_20795
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C GIDA DAO Pyr_redox_2 Thi4 FAD_binding_3 FAD_oxidored HI0933_like
Other DBs
NCBI-ProteinID: QBF33633
LinkDB
Position
complement(4212151..4213956)
AA seq 601 aa
MAAYDYETHEYDVVVVGAGGAGLRATLGMAEQGLRTACVTKVFPTRSHTVAAQGGIAASL
GNMGPDSWQWHMYDTVKGSDWLGDTDAMEYLAREAPKAVYELEHYGVPFSRTEEGKIYQR
PFGGHTTEFGEGPPVQRTCAAADRTGHAILHTLYGQSLKNNAEFYIEYFAIDLIMDDDGV
CQGVLCWKLDDGTLHLFAAKMVVLATGGYGRAYFSATSAHTCTGDGGGMTARAGLPLQDM
EFVQFHPTGIYGAGCLITEGARGEGGYLTNSEGERFMERYAPTYKDLASRDVVSRCMTME
IREGRGVGKDGDHIHLHLNHLPPETLAERLPGISESARIFAGVDVTKEPIPVLPTVHYNM
GGIPTNYWGEVLAPTKDNPDHVAPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGRAAAI
RAGQVVDPKTAVPTPNRRSVEAALSRFDGLRYAKGHVPTAELRLEMQKTMQQDAAVFRTD
KTLAEGQEKMEGVAEKLSDVKVTDTSMVWNSDLMETLELTNLMPNAVATITAAAARKESR
GAHAHEDYPDRDDETWRKHSLVWFKGNQASLGYRGVHLNPLTSHNDGGIDLKKIAPKARV
Y
NT seq 1806 nt   +upstreamnt  +downstreamnt
atggctgcatatgattacgagacgcatgaatatgacgtcgtggtcgtgggcgctggcggc
gcggggttgcgcgccacactcggcatggcggaacagggcctgcggacggcctgtgtaacc
aaggtgttccccacccggtcgcacacggtggcggcccagggcggcatcgcggcgagcctt
ggcaatatgggcccggacagctggcagtggcatatgtacgacaccgtgaaggggtcggac
tggctgggcgatacggatgcgatggaatacctcgctcgcgaggcgcccaaggcggtctac
gagctggagcactacggtgtgcccttctcgcgtaccgaagagggcaagatctatcagcgg
ccttttggcgggcataccacggaattcggcgaaggccccccagtgcagcgcacctgtgcg
gccgccgaccgcacgggccacgcgatcctgcatacgctttacgggcaaagtctgaagaac
aacgcggaattctacatcgagtatttcgccatcgacctgatcatggacgatgacggggtc
tgccagggcgttctctgctggaagctggatgacggcacactgcaccttttcgcggccaag
atggtggtgctggccacgggcggttatggccgcgcctatttcagtgcgacctccgcccat
acttgcacgggcgacggcggcggcatgacggcccgcgcaggtctgccgctgcaagatatg
gaattcgtgcagttccacccgacaggtatctatggcgccggctgcctgatcaccgaaggt
gcacgcggcgagggcggctacctcaccaactccgaaggtgagcggttcatggagcgctat
gcgccgacctacaaggacctcgcctctcgcgatgtggtgtcacgctgcatgacgatggag
atccgcgaagggcgcggtgtgggcaaggacggtgatcacattcacctccacctcaaccac
ctgccccccgaaacgctggctgaacgtttgccgggtatttcggaaagcgcacggatcttc
gcaggtgtcgatgtcacgaaagagccgatcccggttctgccgactgtgcattacaatatg
ggcggcattcccaccaactattggggcgaggttctggcgccgaccaaggataaccccgat
cacgtcgcaccgggcctgatggctgtgggtgaggcaggctgcgcttcggtgcatggggcg
aaccggctgggctcaaactcgctgatcgacctcgtcgtctttggccgggccgcggcgatc
cgcgcgggtcaggttgtcgatccgaagacagccgtgccgacgccgaaccggcggtcggtc
gaagccgcgctcagccgctttgacgggctgcgctatgccaaagggcacgtgcccacggcg
gaactgcggttggagatgcagaagacgatgcagcaggacgctgcggtcttccggaccgac
aaaacgctggccgagggtcaggagaagatggaaggcgtggccgagaagctgtcggatgtg
aaagtgacggacacctccatggtctggaattcagacctgatggagacgctggagctgacc
aacctgatgcccaacgccgtggccacgatcaccgcggccgccgcgcggaaggagagccgg
ggcgcgcatgcgcatgaggactaccccgaccgcgatgatgagacctggcgcaagcacagc
ctggtctggttcaaaggcaatcaggcgagccttggctatcgcggcgtgcatctcaacccg
ctcaccagccacaatgatggcggcatcgacctgaagaaaatcgcgccgaaagcgcgggtt
tactga

KEGG   Thalassococcus sp. S3: CFI11_20800
Entry
CFI11_20800       CDS       T05844                                 
Symbol
sdhD
Name
(GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein
  KO
K00242  succinate dehydrogenase membrane anchor subunit
Organism
thaa  Thalassococcus sp. S3
Pathway
thaa00020  Citrate cycle (TCA cycle)
thaa00190  Oxidative phosphorylation
thaa00650  Butanoate metabolism
thaa00720  Other carbon fixation pathways
thaa01100  Metabolic pathways
thaa01110  Biosynthesis of secondary metabolites
thaa01120  Microbial metabolism in diverse environments
thaa01200  Carbon metabolism
Module
thaa_M00009  Citrate cycle (TCA cycle, Krebs cycle)
thaa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
thaa_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:thaa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    CFI11_20800 (sdhD)
   00650 Butanoate metabolism
    CFI11_20800 (sdhD)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    CFI11_20800 (sdhD)
   00720 Other carbon fixation pathways
    CFI11_20800 (sdhD)
SSDB
Motif
Pfam: Sdh_cyt CybS DUF717
Other DBs
NCBI-ProteinID: QBF33634
LinkDB
Position
complement(4213979..4214350)
AA seq 123 aa
MRYLTDRKRAEGMGSAKTGTAHFWAMKVSSVALLFLIPAFLLTFGPMLGQDYATVTDYFA
RPFPAIVAALTIVVAFMHFKDGVQVLIEDYVHGLNQKVLIILMVCLSYAAAATGLFAIAR
LAL
NT seq 372 nt   +upstreamnt  +downstreamnt
atgcgttatctcacagaccgcaaacgcgcggagggtatgggatcggccaaaaccggcacg
gcccacttctgggcgatgaaggtaagttcggtcgctctgttgttcctgatcccggccttc
ctgctgacctttggtccgatgctgggccaggattacgcgacggtgacagactacttcgcg
cgccccttcccggcgatcgtggccgcgctgaccatcgttgtcgcgttcatgcatttcaag
gacggtgttcaggtcctgatcgaggactatgtccatggtctgaaccaaaaagtgctgatc
atcctgatggtctgcctcagctacgccgccgccgcgaccggccttttcgccatcgcgcgg
ctggcattgtaa

KEGG   Thalassococcus sp. S3: CFI11_20805
Entry
CFI11_20805       CDS       T05844                                 
Symbol
sdhC
Name
(GenBank) succinate dehydrogenase, cytochrome b556 subunit
  KO
K00241  succinate dehydrogenase cytochrome b subunit
Organism
thaa  Thalassococcus sp. S3
Pathway
thaa00020  Citrate cycle (TCA cycle)
thaa00190  Oxidative phosphorylation
thaa00650  Butanoate metabolism
thaa00720  Other carbon fixation pathways
thaa01100  Metabolic pathways
thaa01110  Biosynthesis of secondary metabolites
thaa01120  Microbial metabolism in diverse environments
thaa01200  Carbon metabolism
Module
thaa_M00009  Citrate cycle (TCA cycle, Krebs cycle)
thaa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
thaa_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:thaa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    CFI11_20805 (sdhC)
   00650 Butanoate metabolism
    CFI11_20805 (sdhC)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    CFI11_20805 (sdhC)
   00720 Other carbon fixation pathways
    CFI11_20805 (sdhC)
SSDB
Motif
Pfam: Sdh_cyt Fumarate_red_D
Other DBs
NCBI-ProteinID: QBF33635
LinkDB
Position
complement(4214362..4214745)
AA seq 127 aa
MADVNRGNRPLSPHLTIYRPQLTSMTSILTRITGNAILIAALLIVWWFMAASTSEAHFAV
ANGVITSWFGDLVMFLSLWGLWYHTLAGIRHLIWDNAIGLELETAEKLGWAVIGGSVVLT
ILTALVI
NT seq 384 nt   +upstreamnt  +downstreamnt
atggctgatgtaaacaggggcaatcgcccgctctcgccgcatctgacgatctaccggcca
cagctgacatccatgacgtcaatcctgacccggatcaccggcaacgcgattctgatcgct
gctcttttgattgtttggtggttcatggccgcttcgacatccgaggcgcatttcgccgtc
gcgaatggcgtgatcaccagctggttcggcgatctggtgatgttcctgtctctctggggg
ctttggtatcacacgctggcgggcattcgtcatctgatctgggacaacgccatcgggctt
gagctggaaacggcggaaaagctgggctgggcggtcatcggcggttcggtcgtgctgacc
atcctgacggcgcttgtgatataa

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