Thalassospira marina: CSC3H3_11435
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Entry
CSC3H3_11435 CDS
T05224
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
thac
Thalassospira marina
Pathway
thac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CSC3H3_11435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thac03000
]
CSC3H3_11435
03400 DNA repair and recombination proteins [BR:
thac03400
]
CSC3H3_11435
Enzymes [BR:
thac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CSC3H3_11435
Transcription factors [BR:
thac03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CSC3H3_11435
DNA repair and recombination proteins [BR:
thac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CSC3H3_11435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
TetR_N
HTH_3
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AUG53254
UniProt:
A0ABM6Q9N0
LinkDB
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Position
complement(2502543..2504090)
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AA seq
515 aa
AA seq
DB search
MEQISDDICYTALLARDNRFDGRFYTAVKTTGIFCRPICPAVTPKRQNVEFYPTAEAAMA
HGFRPCLRCRPEAAPGSAAAAGVHATVRRAVRLIEDGALSTGSVEDLADRLGVGARHLRR
IFKDHTGVSPQEHARARRLLRARQLIVDSNLSMTEIADIAGFGSLRRFNDAMKEAYGHAP
TAFRRGLRVIDASPSDHTGNRYNPTTRQKDDMVLRLKPRQPFDRDFILGFFRDRAIQGLE
AIGDDYYARGFCLDNAPGLMICRFEKDGSIEICLRGDDRGSLLEIGGRVRRLFDLDADMS
AITAIFANDPLLAPLVQRRPGLRVPGCWDRFELAMRAVLGQQVSVAAARTLAGRIVARYG
RALPDALVAGTGITHLFPEPAALQGHDLIPIGLTRRRAQTLSDVIDLFAATDFRDQPGSD
ILAQMAKIKGIGPWTLNYFALRGLGDPDAFPAADLGILKGSQIGGGPATAKDLEKHSVVW
RPWRAYAAQYLWSALIPDQGGNDLIEKEDDHENGN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaatcagcgatgacatatgttatacggccctgctggcccgtgataaccggttt
gacgggcggttttacactgccgttaaaaccaccggcatattttgtcggcctatctgcccg
gcggtaacgccaaagcggcagaatgtggaattttatcctacggccgaggcggcaatggca
cacggttttcgcccctgcctgcgttgccggcccgaagccgcaccgggcagtgctgccgcc
gccggggtgcacgccaccgttcgccgcgctgttcgcctgatcgaggatggtgccctaagc
accgggtcagtcgaggatttggctgatcgccttggcgtgggcgcacggcaccttcgccgg
atattcaaggatcataccggcgtttccccccaggaacatgcccgtgcccggcggcttttg
cgggcgcggcagcttattgtcgatagtaacctgtcgatgacggaaattgccgatattgcc
ggttttggcagcttgcgccggtttaatgacgccatgaaagaagcctatggccatgcacca
acggcttttcggcgtggtttacgggtcattgatgcatcgccatctgaccataccggaaat
cgctataatccgaccacaagacagaaggacgatatggttttgcgcttaaaaccccgccag
ccctttgaccgtgattttatattggggttctttcgcgaccgcgccattcaggggcttgag
gccattggcgatgattattatgcgcgtggcttctgccttgataatgcaccggggcttatg
atttgccgttttgaaaaggatggcagcatcgaaatatgcctgcggggcgacgatcgcggc
agcctgcttgaaattggcgggcgggtgcgccgcctttttgaccttgatgccgatatgagt
gcaattacagccatttttgccaatgacccgttattggccccgctggtacaaaggcggccg
ggcttgcgtgtgccgggctgttgggacaggtttgaactggccatgcgcgctgttttgggc
cagcaggtatctgttgctgcggctcgtacgctggccggtcgtattgttgcgcgttatggg
cgtgcactgcctgatgcactggttgctggtactggaattacgcatctgtttcccgaaccc
gcggctttgcagggccatgatctgatccccatcgggctgacccgtcggcgtgcgcagaca
ttatccgatgtaattgacctgtttgctgcaacagattttcgcgaccagcccggcagcgat
attttggcgcagatggcgaaaatcaagggcattggtccctggacgcttaactattttgcg
ctgcgggggctgggcgaccccgatgccttcccggcggctgatctgggcattttaaagggg
tcgcaaatcggcggtggcccggcaacggccaaagaccttgaaaagcattcggtggtgtgg
cggccctggcgggcctatgccgcgcaatatttgtggtcggcacttatcccggatcaaggt
gggaacgacctgattgaaaaggaagatgaccatgaaaacggtaattga
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