Pukyongiella litopenaei: C6Y53_08385
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Entry
C6Y53_08385 CDS
T05357
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
thas
Pukyongiella litopenaei
Pathway
thas03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C6Y53_08385 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thas03400
]
C6Y53_08385 (mutM)
Enzymes [BR:
thas01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C6Y53_08385 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C6Y53_08385 (mutM)
DNA repair and recombination proteins [BR:
thas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C6Y53_08385 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AVO37721
UniProt:
A0A2S0MPP7
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All DBs
Position
1683619..1684470
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AA seq
283 aa
AA seq
DB search
MPELPEVETVRRGLAPVMEGAVIAQAEVNRPDLRWPLPEGMAERLTGRRVDRLRRRSKYL
LAGLDSGETLLVHLGMSGRITVSGDPLGRFAHDHPAREKHDHVVLHMGNGARVTYNDPRR
FGAMDLLASDGQDRHPLLAVLGPEPLGNEFGEPYLIDALKGRRTAIKAALLDQGLIAGLG
NIYVCEALFRAGISPLRKAGNISAARVAALVPVIRTVLEDAIAAGGSSLRDYRQANGELG
YFQHSFDVYGREGQPCRNPGCDGTIRRVIQSGRSSFHCPRCQR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactacccgaagtggaaaccgtgcgccgggggctggcgccggtgatggaaggc
gcggtgatcgcgcaggccgaggtcaatcgccccgacctgcgctggccgctgcccgagggc
atggccgagcggctgacggggcggcgggtggaccggttgcgacggcggtcgaaatacctg
ctggccggtctcgattccggtgaaacgctgctagtccacctggggatgtcagggcggatc
accgtctcgggcgatccgctgggccggttcgcgcacgaccatcccgcgcgggaaaaacac
gatcatgtggtgctgcacatgggcaacggcgcgcgcgtcacctataacgatccgcgccgg
ttcggggccatggacctgctggcctccgacgggcaggaccgccacccgctgctggcggtg
ctggggcccgagccgctgggtaacgaattcggcgaaccctacctgatcgacgcgctgaaa
gggcgcaggacggcgatcaaggcggcgctgctggaccaggggctcatcgccggtctcggc
aatatctatgtctgcgaagccctgttccgcgccggcatctcgccgctgcgcaaggccggc
aacatttccgcggcgcgcgttgcggcgctggtcccggtcatccgcaccgtgctggaggac
gcgattgccgccggcgggtcgtcgctgcgcgattaccggcaggcgaatggcgaactcggc
tattttcagcacagtttcgatgtctatggccgcgagggccagccctgccgcaatccgggc
tgcgatggcacgatacgtcgcgtcattcagtccggccgctcgagcttccattgcccgcgc
tgtcaaagatag
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