Thermomonas sp. HDW16: G7079_08535
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Entry
G7079_08535 CDS
T06498
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
theh
Thermomonas sp. HDW16
Pathway
theh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
theh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7079_08535 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
theh03019
]
G7079_08535 (pnp)
03016 Transfer RNA biogenesis [BR:
theh03016
]
G7079_08535 (pnp)
Enzymes [BR:
theh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
G7079_08535 (pnp)
Messenger RNA biogenesis [BR:
theh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G7079_08535 (pnp)
Transfer RNA biogenesis [BR:
theh03016
]
Prokaryotic type
tRNA degradation factors
G7079_08535 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
KH_5
S1_2
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
QIL20776
UniProt:
A0A6G7ZVM5
LinkDB
All DBs
Position
complement(1836533..1838641)
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AA seq
702 aa
AA seq
DB search
MAKISKSFQYGDKTITLETGEIARQAGGAVMVSCDGTMVLCTAVAAKTQREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLTSRLIDRPIRPLFPEEFKNEVQVIATVMSLN
PEIDGDILALIGCSAAVSLTGAPFQGPIGAAKVGYKDGKYLLNPTVSELKESQLELVVAG
TSEAVLMVESEAAELSEDVMLGAVMFGHKHMQVAINAINELVTEAGTKTWDWKAPAKNES
LIAAVKEAVGGQLAEAFQVRDKLQRKDAISAIKKDVVGALAPRAEGEGWNPADLGKEFGE
LEYQTMRGSVLDTKVRIDGRALDTVRPITSKVGVLPRVHGSSLFTRGETQAIVAVTLGTA
RDGQVIDAVGGEYKEHFLFHYNFPPYSVGEAGRMMGPKRREIGHGRLAKRGVLAVMPTME
AFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPVKAPVAGIAMGLVKEGDNFVVLS
DILGDEDHLGDMDFKVAGTSNGISALQMDIKIQGITEEIMKVALAQAKAGRLHILGEMAN
ALTAPRGELSEFAPRLLTIKIHPDKIREVIGKGGSVIQAITKETGTQIDIQDDGTITIAS
VNAAAGQAAKSRIEQITSDVEPGRIYEGKVAKLMDFGAFVTISPGKDGLVHVSQISNDRV
EKVSDVLKEGDMVKVKVLEVDKQGRIRLSMKAVAEGEGVAAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagatcagcaagagcttccagtacggcgacaagaccatcaccctcgaaaccggc
gagatcgcacgccaggccggcggcgcggtcatggtctcctgcgacggcaccatggtgctg
tgcaccgcggtggcggcgaagacccagcgcgaaggccaggacttcttcccgctgaccgtg
gattaccaggagaagttctacgccggcggtcgcatcccgggtggcttcttcaagcgcgaa
ggccgcgcgaccgaaaaggaaaccctgaccagccgcctgatcgatcgcccgatccgcccg
ctgttcccggaagagttcaagaacgaagtgcaggtcatcgcgaccgtcatgtcgctgaac
ccggaaatcgatggcgacatcctggcgctgatcggctgctccgccgccgtgtcgctgacc
ggtgccccgttccagggcccgatcggtgccgccaaggtcggttacaaggacggcaagtac
ctgctcaacccgaccgtcagcgagctgaaggaatcgcagcttgagctggtcgtcgccggt
accagcgaagccgtgctgatggtggaatccgaagccgcagagctgtccgaagacgtgatg
ctgggcgcggtgatgttcggccacaagcacatgcaggtcgcgatcaacgcgatcaacgaa
ctggtcaccgaagccggcaccaagacctgggactggaaggccccggcgaagaatgaatcg
ctgattgccgccgtcaaggaagccgtgggcggccagctggctgaagccttccaggtgcgc
gacaagctgcagcgcaaggatgcgatttccgcgatcaagaaggatgtggtcggtgcgctg
gcaccgcgtgccgagggcgaaggctggaacccggccgacctgggcaaggaattcggcgag
ctggaataccagaccatgcgcggttcggtgctggacaccaaggtccgcatcgacggccgt
gcgctggacaccgtgcgcccgatcacctccaaggtcggcgtgctgccgcgcgtgcacggc
tcctcgctgttcacccgtggcgagacccaggcgatcgtcgccgtgaccctcggcaccgcg
cgtgacggccaggtcatcgacgccgtcggtggcgagtacaaggaacacttcctgttccac
tacaacttccccccgtactcggtgggcgaagccggccgcatgatgggcccgaagcgccgt
gaaatcggccacggccgcctcgccaagcgcggcgtgctggcggtgatgccgaccatggaa
gccttcccgtacacgatccgcgtggtctccgagatcaccgagtcgaacggttcctcgtcg
atggcctcggtctgtggttcctcgctggcgctgatggatgccggcgtaccggtcaaggca
ccggtcgcgggtatcgcgatgggcctggtcaaggaaggcgacaacttcgtcgtgctgtcc
gacatcctgggcgacgaagatcacctcggcgacatggacttcaaggtggccggcaccagc
aacggcatctccgcgctgcagatggacatcaagatccagggcatcaccgaggagatcatg
aaggtcgcgctggcccaggccaaggctggccgcctgcacatcttgggcgagatggccaat
gcgctgaccgcgccgcgtggcgagctgtccgagttcgcgccgcgcctgctgaccatcaag
atccacccggacaagatccgcgaagtgatcggcaagggcggttcggtgatccaggcgatc
accaaggaaaccggcacccagatcgacatccaggatgacggcaccatcaccatcgcatcg
gtgaacgccgctgccggccaggccgccaagtcgcgcatcgagcagatcacctccgacgtc
gagccgggccgcatctacgagggcaaggtcgccaagctgatggacttcggcgcgttcgtc
accatttcccccggcaaggacggcctggtgcacgtctcgcagatctccaacgaccgcgtc
gagaaggtctccgacgtgctcaaggaaggcgacatggtcaaggtcaaggtgctggaagtc
gacaagcagggccgcatccgcctgtcgatgaaggccgtggccgaaggcgagggcgtcgcg
gccgaataa
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integrated database retrieval system
