Thermosipho sp. 1070: Y592_00245
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Entry
Y592_00245 CDS
T04909
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
ther
Thermosipho sp. 1070
Pathway
ther02024
Quorum sensing
ther03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ther00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Y592_00245
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Y592_00245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ther03019
]
Y592_00245
03036 Chromosome and associated proteins [BR:
ther03036
]
Y592_00245
Messenger RNA biogenesis [BR:
ther03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Y592_00245
Chromosome and associated proteins [BR:
ther03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Y592_00245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
ANQ52980
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All DBs
Position
complement(52067..52342)
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AA seq
91 aa
AA seq
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MAEKFNLQDRFLNILRTSKIPVKVYLVNGFQTKGIIRSFDNFTMLLENGSQQNLIYKHAV
STIMPEAFVRLTSKQSQDESENNEKESNGEE
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaatttaatttacaggataggtttttgaacattttaagaactagcaaaatt
cctgtaaaagtttatttagtaaacggttttcaaactaagggtattatacgatcatttgat
aattttaccatgcttttggaaaatggtagtcagcaaaatttaatttacaaacatgctgta
agtactattatgcctgaggcgtttgttagattaacgagtaaacagtcgcaagatgaaagt
gaaaataatgaaaaggaaagtaatggagaagaataa
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