Thiohalocapsa sp. PB-PSB1: N838_00965
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Entry
N838_00965 CDS
T07019
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
N838_00965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thip03400
]
N838_00965
Enzymes [BR:
thip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N838_00965
DNA repair and recombination proteins [BR:
thip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N838_00965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
AAA_30
AAA_22
AAA_19
zinc-ribbons_6
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QQO52162
LinkDB
All DBs
Position
195557..197806
Genome browser
AA seq
749 aa
AA seq
DB search
MKTTDANGTYIQVAVAAPVAELFDYLPPYPAGDIAILPGMRVLVPFGRGRRIGMVTAIST
TTSLAVDRLKRIETLLDPYPLLSAEDLRFVLWAASYYRSSPAEALFSALPARLRRPEALL
HNAPPGWRVAAVPAAYEQRQHIQQRAPRQAAILALLDAHPKGMNDAALRQHLGNCGAALR
ALAEKGLIERCHIDNHSTNTAAESSADKSYPSIQSLELNPDQQAAVCAVRETTGFGCFLL
DGVTGSGKTEVYLRLIGDALRLGQQVLVLVPEIGLTPQLYDRFAQRIDVPMAVLHSSLSK
RERELAWQQASSGRARLALGTRSAVFTPLPDLGLIIVDEEHDLSLKQQEGFRYSARDLAV
RRAQVTACPVLLGSATPSLESLHNARLGRYRPLRLPQRAGAAIAPRILIADIRSQPLETG
LCHALLTRMEQEISAGNQVLLFLNRRGFSPVLTCHDCGWISECQQCDARMTLHLERDQLL
CHHCGLMLVRPARCPYCESPDLRPLGQGTERVEDSLRQRFPGIPLARIDRDSTRRKGELE
RLLAAAERAEFRILLGTQMLAKGHHFPGITLVGILDLDQGLYGSDFRATERMAQLLLQVA
GRAGRAERAGTVLLQTRHPRHPLLTRLLHDGYGAFADDALAERAEARLPPFSHQALLRAD
SPKPEEALSFLRQALATAQPLAPPSVELWGPAPAQMERRAGRIRAQLLLQAPDRGTLQRL
LGTLLPRLRTLPTPRHLRWSIDVDPQESL
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaccgatgccaacggaacctatattcaggtcgcggtggcagcaccggtcgcg
gaattattcgactatttgcccccctatccagcaggcgatattgcgatcttacccggcatg
cgcgtgctggtgccattcggtcgcggtcgtcgcattggcatggtcacggccatcagcaca
accaccagcctggctgtggaccggcttaagcgcattgagaccctgctggatccttaccca
ttgctcagcgccgaagacctacgcttcgttctttgggcagcgagttattatcgcagcagt
ccggccgaagccctattcagcgccctgcccgctcgcttgcgacgccctgaggcgttgttg
cacaacgcgccccccggctggcgtgttgctgcagtgccggcagcctacgagcagcgtcag
cacattcagcaacgcgcaccacgccaggcagcgatactcgcgttgctcgatgcgcatccg
aaaggcatgaacgatgccgccttgcgccagcatctcggcaactgtggcgcggccctgcga
gcattggccgagaagggattgatcgaacgttgccatattgacaatcacagcaccaatacc
gctgctgaatctagcgcagacaaatcgtatccatcaatccaatccctcgagctgaatccg
gatcaacaggccgcggtgtgcgcggtacgcgagacgaccggttttggctgctttctgctc
gacggcgttaccggcagcggcaagactgaagtctatctacgcctgatcggcgacgccctc
cggctcggccaacaagtcctggtgctggtgcctgagattggcctgacaccacagctctac
gatcgctttgcccaacgcattgacgtacccatggctgtgctgcattcctccctgagtaaa
cgcgagcgcgagcttgcttggcaacaagcttccagcgggcgcgcacggctggccttggga
acacgctcggcagtgttcacccccctaccggatctgggcctgattattgtcgatgaagaa
catgatctatcattgaagcaacaggagggttttcgctactccgctcgcgacctggcggtg
cggcgcgcccaggtcaccgcctgcccagtattgctcggctccgccacaccgtctctggag
tcgctgcacaacgcccggctcgggcgctatcggccgctgcgtttgccacagcgcgcgggc
gccgcgattgccccgcgcattctgatcgcggacattcgctcgcaaccattggaaaccgga
ctgtgccatgcattgctgacgcgcatggagcaggagatcagcgctggcaatcaggtgctc
ctgtttctgaaccggcgcggtttctcgccggtattgacctgccatgactgcggctggatc
agcgaatgccaacagtgcgatgcgcgcatgaccttgcatctcgagcgcgaccagttgctc
tgtcatcattgcggtttgatgctggtgcgcccagcgcgctgcccttattgtgaatcgccg
gacctacgccccctgggccaaggcaccgagcgggtcgaagacagtctgcgacaacgcttt
ccgggcatcccgctggcgcgcatcgaccgtgacagcactcggcgcaagggcgaactggag
cgtctgctggccgctgccgaacgcgccgagttccgcatcctgctaggcactcagatgctg
gcgaaagggcatcatttcccaggtatcacgctggttggtatcctggacttggatcagggg
ctgtatggcagtgacttccgcgccaccgagaggatggcgcaattattgctccaagtggcc
gggcgtgccgggcgtgccgagcgagcaggcacggtcctgctccagacccgtcatcctcgc
catccgctgctgacgcgactgctgcacgacggctacggcgcctttgccgacgacgccctg
gccgagcgcgccgaggccagattgccacccttcagccatcaggccctgctgcgcgcggac
agcccgaagccagaggaagccctgagctttttgcgccaagccctcgccaccgcgcagccg
ctggcgccacccagtgtcgagctgtggggaccggcgccggcgcagatggagcgccgtgcc
gggcgcatacgcgcccagctgctgctgcaggcacctgatcgcggcacattgcagcggcta
ctcggcactttattgccacgactgcgaacgctgccgacgccgcggcatttgcgctggagt
atcgatgtagatccgcaggagagcttgtag
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