Tarenaya hassleriana (spider flower): 104805137
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Entry
104805137 CDS
T04125
Name
(RefSeq) probable pectate lyase 3 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj00040
Pentose and glucuronate interconversions
thj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104805137
Enzymes [BR:
thj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104805137
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Motif
Pfam:
Sm_multidrug_ex
Pectate_lyase_4
Beta_helix
Pec_lyase_N
Motif
Other DBs
NCBI-GeneID:
104805137
NCBI-ProteinID:
XP_010527871
LinkDB
All DBs
Position
Unknown
AA seq
709 aa
AA seq
DB search
MAISALASVSPFALSSFYRKTHLVISAPTRVSSPNSPEKPWLSQNLFLRPQNSCLFHPLR
RNFTRFCYFRDGFVGETGDEKDSIKLPSFDVKPVKFAVWVVFWASLSLFWFARSGDAKAA
TDSIKASSFGLRIAAALRRSGWPDEAVVFALATLPVIELRGAIPVGYWLQLKPIALTFFS
VMGNMVPVPFIILYLEKFANFLAGKSRSASKLLDMLFRRAKEKAGPVEEFQWLGLMLFVA
VPFPGTGGGRGAIIASVLGMPFWSAVSANFLGVVVAGLLVNLLVNLGLKQAVLAGIALFL
ISTFMWSVLRHVNKAVEETMKTGNNGTRRELLQVGQSRGQHPKRRNLGGKCVAYNPIDRC
WRCDPGWSKNRKKLADCALGFGRKTTGGKAGPYYVVTDASDDDLLNPKAGTLRHAVTREE
PLWIVFAKSMVIKLQQELIMTSDKTIDGRGVRVHITGGAGFTLQFVNNVIIHNIYIKNIV
PGNGGLIRDSETHFGLRTRSDGDGINIFGATNVWIDHVSMSHCSDGMIDAIQGSTGITIS
NCHLTDHQEVMLFGGTDKDVIDKKMQITVAFNHFGKRLVQRMPRCRYGLIHVVNNDYTHW
EMYAIGGNMNPTIISQGNRFIAPPNEEAKQVTKREYTPFTEWKSWNWQSEGDYFLNGAYF
VQSGRANALSAAPKNPVPSKFAIRPQPGTLVRKLTMDAGVLSCKKRKPC
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttctgcgttagcctccgtatctccattcgcgttatcttccttttacaggaaa
acccatctcgtaatttcggcacccactagggtttcttctccgaattctccagagaaaccc
tggttgagccaaaaccttttcctacgaccccaaaattcatgtcttttccatccgttacgc
cgtaatttcaccaggttttgttattttcgagatgggtttgtcggagaaaccggagatgaa
aaggatagtatcaagcttccatcttttgatgtaaaaccagtgaaattcgcagtatgggtc
gtgttctgggcttctctatctctgttttggttcgcgaggtcaggtgatgcgaaagctgcg
acggattcaatcaaagcatcgagcttcggtctaagaatcgccgccgctctccgccgctca
gggtggccggacgaggcggtggtttttgctttagccactcttccggtcatagagctccgt
ggtgctattcccgtcggttactggttgcagctcaaacccattgctctcactttcttctct
gttatggggaatatggtcccggttccgtttatcatactgtacctggagaagtttgcgaat
ttcttggcgggcaagagccgctctgcatctaagctactagacatgttattcagaagagcc
aaggagaaggcaggtccggtggaagagtttcaatggctggggctaatgctcttcgtggct
gttccgtttcccggcacaggtggggggaggggagccataatagcttcagtgctcggcatg
ccgttctggtcggctgtctctgcgaatttcttgggggtggtggtggctggacttctggtg
aacctgctggtgaatcttggtctgaaacaggcagtcctcgctgggattgctctcttcctg
atatctacatttatgtggagtgttctcagacacgtcaacaaggcggtggaggagacgatg
aaaacaggcaacaacggcacgaggagagagttactgcaggtgggccaaagccgaggccaa
cacccgaagcgacgcaacttaggaggaaagtgcgtagcctataacccgatcgatagatgc
tggagatgtgaccccggctggtcgaaaaatcggaagaagttggcggattgtgcgctcgga
ttcggccgtaagaccaccggaggtaaggctggaccctactatgttgttacagatgcatcc
gacgatgatcttttgaacccgaaagcgggaaccctaaggcatgccgtgacgagagaggag
ccactctggatcgtgtttgcaaagagcatggttataaaactgcagcaagaactgatcatg
accagcgacaagacgatagatggacggggagtgagggttcacatcacgggcggtgcgggg
ttcaccttgcaattcgtgaacaacgtgatcatccacaacatctatatcaagaacatcgtg
cctgggaatggcgggttgataagagattccgagacgcatttcgggcttcggacaaggagt
gatggcgatgggatcaacatattcggagccactaatgtctggatcgatcatgtctcgatg
tcccactgcagcgacgggatgattgacgcaatccaagggtcgacggggatcaccatttcc
aactgccacttgaccgaccaccaagaggtgatgctgttcggggggacggacaaggatgtg
atagacaagaagatgcagataacggtagcgttcaaccattttgggaagagattggtgcag
aggatgccgaggtgcagatacggactgatccatgtggtgaacaatgactacactcactgg
gaaatgtatgccattggtggtaacatgaaccctactatcatcagccaagggaatcgcttc
attgcccctcccaacgaagaagccaagcaggtaacgaagagagagtacacaccgtttacc
gagtggaaatcgtggaactggcagtcggagggagattacttcctgaacggagcatacttt
gtgcagtcggggagagcaaatgcgttgagtgcagccccgaagaatccagtcccgagcaag
tttgcgatcaggccgcagccagggactttggtcaggaaactcaccatggacgctggggtc
ctcagctgcaagaaacgtaagccctgttga
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