KEGG   Tarenaya hassleriana (spider flower): 104824188
Entry
104824188         CDS       T04125                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5C
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03020  RNA polymerase
thj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104824188
  09124 Replication and repair
   03420 Nucleotide excision repair
    104824188
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:thj03021]
    104824188
   03400 DNA repair and recombination proteins [BR:thj03400]
    104824188
Transcription machinery [BR:thj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     104824188
  RNA polymerase III system
   RNA polymerase III
     104824188
  RNA polymerase I system
   RNA polymerase I
     104824188
DNA repair and recombination proteins [BR:thj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      104824188
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N MpsC
Other DBs
NCBI-GeneID: 104824188
NCBI-ProteinID: XP_010554476
LinkDB
Position
Unknown
AA seq 219 aa
MAASGGESQCIGRFVDESDVDTKRVYLARKTVLEMLHDRGYEVVDSELSCSLDEFRSSFG
DKPNLERVRICVPLRDDPGRKMLVIFMGTEPITVKSIRAVRGQIAGSEGLHGLILVLQSK
MNRFAQNELPTFPYKVETFMITDLLVNISKHVMQPKHEVLSEEEKARLLKKYGLEDKMLP
RMLESDSFVKYYGLEKGQVVKFMYKAEPVGSFVTYRCIV
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcggcttcaggcggcgagagtcagtgcattgggaggttcgtggacgaaagtgacgtg
gacaccaagcgggtttacttggctcgcaagacagttctcgagatgcttcacgacaggggc
tacgaggttgtcgactcggaactgagttgctcactcgacgagttccgttccagtttcgga
gacaagccgaatctcgaacgagtccgtatttgcgtccctcttcgtgatgatcctggtaga
aagatgcttgttatattcatggggactgaaccgataaccgtgaaatcaattcgtgctgtc
cgtggtcagattgctggcagtgaaggcttacatggcctgatcttggtcttacagagtaaa
atgaaccgctttgctcaaaatgaattgccaacatttccttacaaggttgaaacttttatg
ataacagacttgttggtgaacatctcaaagcacgttatgcagccaaaacacgaggtttta
agcgaagaagagaaggcaaggttgttgaagaagtatggcctagaggacaagatgcttcca
cgtatgctggagagtgacagctttgtcaaatactatggattggagaagggtcaggtggtc
aagtttatgtacaaggcagagcctgttggatcatttgtcacataccgttgcatcgtttga

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