Tarenaya hassleriana (spider flower): 104824491
Help
Entry
104824491 CDS
T04125
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104824491
03041 Spliceosome [BR:
thj03041
]
104824491
03036 Chromosome and associated proteins [BR:
thj03036
]
104824491
Enzymes [BR:
thj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104824491
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104824491
mRNA cycle factors
Common to processing body (P body) and stress granule
104824491
Spliceosome [BR:
thj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104824491
Chromosome and associated proteins [BR:
thj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104824491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NPF
Motif
Other DBs
NCBI-GeneID:
104824491
NCBI-ProteinID:
XP_010554902
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MSASWADVAESEKVVSGFSSHNSQPSRPAYVPPHLRNMQTSAEQVAHASANGRVGYSGPS
GGSRWATGGAGGGGYRTDAGRPGYGGQQGDGGWNNRSRGWDRREREVNPFGDEAELEQPF
TEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRNA
IPILLSGRDLMACAQTGSGKTAAFCFPIISGIMKEPYVQRPRGSRTVYPLALILSPTREL
ACQIHDEARKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARISL
QMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPSGVRQTMLFSATFPREIQRLASDFLS
NYIFLAVGRVGSSTELIVQRVEFVHESDKRSHLMDLLHAQRESGIQDKQALTLVFVETKK
GADSLEHWLCMNGFPATSIHGDRSQQEREVALRSFKSGRTPILVATDVAARGLDIPHVAH
VVNFDLPNDVDDYVHRIGRTGRAGKTGLATAFFNDNNTSLARPLADLMQEANQEVPAWLT
RYASRASYGGGKNRRSGGRFGGRDFRKEGSFSRGGGGNDYYSGGYAAAAQGGGGGGGYGY
GYGPGVTSAWD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcatcatgggcagatgttgctgaatcagagaaggtggtctctgggttttctagt
cacaattctcagccatcaagacccgcttatgttcctccacatctgcggaacatgcaaacg
tcagctgaacaggttgctcatgcttcagccaatggtcgtgtagggtacagtggcccatcc
ggtggttcacgatgggctactggtggtgctggtggcggcggctacaggacagatgcaggg
cgtcctggctatggtggacaacaaggagatggtggttggaacaacagaagtagaggttgg
gaccgtagggaacgtgaagttaatccatttggtgatgaggctgagttagaacaacctttt
actgagcaggagaatacaggcatcaactttgatgcctatgaggatattccggtcgagaca
agtggggataatgtcccacctcctgttaatacgttcgccgagatagacctgggggaggct
ttaaacctaaatatccgtaggtgcaaatatgtcaagccaacacctgtgcaacgtaatgcg
attccgatattgctttcaggaagggatctgatggcttgtgctcagactggatctgggaag
acagctgccttttgctttccaataattagtggaattatgaaagagccatatgtgcagagg
ccacgcggttcgcgtacagtctatcctcttgcactcatcctctcaccgacaagagaactg
gcatgccagattcatgatgaagccagaaagttctcctatcaaaccggtgtgaaggttgtt
gttgcctatggaggaacaccgattaaccaacagcttcgagagcttgagaggggagttgat
attcttgtggctactcctggaaggttgaatgatttgcttgagagagctagaatctcgtta
cagatgattagatttttagctcttgatgaggcagataggatgctggacatgggctttgaa
ccccaaataagaaagattgttgaacagatggacatgcctccaagtggagttcggcagaca
atgttgttcagtgctacttttccaagagagattcagagacttgcgtctgatttcctgtca
aactatatatttttggcggtgggaagggtgggttcaagtactgaattaattgtccaaaga
gtagagtttgttcatgaatctgacaagagaagccatcttatggacttgcttcatgcgcaa
agagagagtggcatccaagacaagcaagctctgacattagttttcgtcgagacaaagaag
ggagcagattcattggaacactggctgtgcatgaatgggtttccagcaacctccattcat
ggtgatagatcacaacaggaaagagaagtggcgttgaggtcattcaagagcgggaggact
ccgattttggtggcaacagatgtcgcagctcggggactcgacattccacacgtggctcac
gtcgtgaactttgatctaccaaacgatgtagatgactatgtccaccgcattggacggaca
ggacgtgcgggcaagacaggactagcgactgcgttcttcaacgacaacaacacatcactt
gcaaggccactcgctgatctgatgcaagaagcaaaccaggaggtgcctgcctggctcact
cggtacgcgtctcgtgcttcttatggaggcggtaagaaccgtcgttctggtgggcgtttc
ggtggtcgtgacttcagaaaggaaggttctttcagtagaggcggtggcggtaatgattac
tacagcggcggttatgctgcagctgcccagggtggcggcggcggcggcgggtacggttat
gggtatggccctggagtgaccagtgcttgggattag
DBGET
integrated database retrieval system
