Tarenaya hassleriana (spider flower): 104826108
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Entry
104826108 CDS
T04125
Name
(RefSeq) probable pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj00040
Pentose and glucuronate interconversions
thj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104826108
Enzymes [BR:
thj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104826108
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104826108
NCBI-ProteinID:
XP_010556943
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MVVPAKRTWGFLALLFIAAMANAAEDKISLSREEPEWNEHAVADPDKVADHVASLVEMSM
RNHTERRKLGYFSCGTGNPIDDCWRCDSNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVT
DPRDDDPVNPRPGTLRHAVVQDRPLWIVFERDMVIQLKQELIVNSFKTIDGRGANVHIAN
GGCITVQFVTNVIIHGLHIHDCKPTGNAMVRSSETHFGWRTMADGDAISIFGSSHIWIDH
NSLSHCADGLVDAVMGSTAITISNNHFAHHNEVMLLGHSDSYTRDKAMQVTIAFNHFGIG
LIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRYAAPTNPFAKEVTKRVET
PASKWKGWNWRSEGDMLLNGAYFTPSGAGASGSYARASSLAAKSSSMVGAITSDAGALPC
RRGSRCSS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggtggttcctgcgaaacggacttggggtttcctcgctctgctgttcattgcggcaatg
gcgaacgcagcggaggataagatatctctctctagagaggagccggagtggaacgaacat
gcggtagctgatccggacaaagttgcggaccatgtcgcctctttggtcgaaatgagcatg
cgaaatcacacggagaggaggaagctagggtacttttcttgcggaacgggcaacccaatc
gacgactgctggagatgcgactcgaactggcacaagaaccgcaaacgcctcgccgactgc
gggatcgggttcggccgcaacgccatcggcggccgcgacggacgcttctacgtcgtcacc
gacccacgagacgacgacccagtcaaccctagacctggaactctccgacacgccgtcgtc
caggaccgaccgctctggatcgtgttcgaacgcgacatggtgattcagttgaaacaggaa
ctcatcgtcaacagcttcaagaccatcgacggtcgtggcgctaacgtccacatcgccaat
ggtggctgcatcacggttcagttcgttacgaacgtgatcatccacggtttacacatccat
gactgtaaaccgactggtaacgccatggtgagaagctccgagacgcatttcgggtggagg
acgatggcggacggtgacgccatttcgattttcgggtcgagtcatatctggatcgatcac
aactcgctgtctcattgcgctgatgggctggttgacgccgtcatgggatctacagcgatc
accatctctaacaaccacttcgcccaccataacgaggtgatgttgcttggacacagcgat
tcttacacaagggacaaagctatgcaagtgaccatcgcttttaaccatttcggtatcggt
ctcattcagagaatgcctaggtgcaggcatggctacttccacgttgtgaacaacgactac
acgcactgggagatgtacgccatcggtggaagcgcagatcccacaatcaacagccagggc
aaccgttacgccgctccgacaaacccttttgccaaagaggtgacgaagagagtggaaacg
cctgcgagcaaatggaagggatggaactggagatcggaaggagacatgcttctgaacggc
gcatacttcactccctctggagccggagcttcaggaagctacgctcgagcctcgagcctg
gcggctaagtcatcttccatggtcggagccatcacttctgacgccggcgctcttccttgc
cggcgaggctctcgctgctcgtcatag
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