Tarenaya hassleriana (spider flower): 104827001
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Entry
104827001 CDS
T04125
Name
(RefSeq) probable pectate lyase 4 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj00040
Pentose and glucuronate interconversions
thj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104827001
Enzymes [BR:
thj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104827001
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104827001
NCBI-ProteinID:
XP_010558308
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MGNSQCLHRCCNGAETPASSFSPYKAGESPPPPSSPAINMAVPYSDADSSLRSLAGAAEG
FGRSAVGGLHGPIHFVTSLAEDGPGSLREACRRTEPLWIAFKVSGTVNLTSFLSVSSHKT
IDGRGQRIKITGKGLRLQECENVIVCNLEFEGGVGPDADAIQIKPKSSNIWIDRCSLRNY
YDGLIDITRESTDVTVSRCHFKNHDKTMLIGGHPSHVTDRCIRVTIHHCFFDGTRQRHPR
IRFGKVHLYNNYTQHWAIYAIGAGVESQIHSQCNIYEAGKKKAVFKYITEKAVDKKEAGS
GFVRSEGDLFLNGAQPCLEHGGEDRRTFRPEEHYATWTVAPPTDRLKHFLKTSAGWQDVP
LPPEK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgggaaactcacagtgccttcacagatgttgtaacggcgccgaaactcccgcgtcctct
ttctcgccatataaagccggtgaatctccgcctccaccgtcatctccggctatcaatatg
gcggttccgtacagcgacgccgattccagcttgcgctctctcgccggcgccgccgagggc
ttcggtcgttccgccgtcggtggcctccacggccccattcacttcgtcacttctttagcc
gaggacggaccagggtcgctgagggaggcttgcagaaggacagagccgctgtggatagcg
ttcaaagtctcgggaacggtcaatctgacgtcgttcttgagcgtatcgtcgcacaaaacg
atagacgggagagggcagaggatcaagatcacgggcaaaggccttcggcttcaagaatgc
gagaacgtcatagtatgcaatcttgagttcgagggcggtgtaggaccggacgctgacgct
atccagatcaagcccaagtcctctaacatttggatcgatcgatgcagccttcggaattac
tacgacggccttatcgatatcacgcgagaaagcaccgacgtaactgtttcgaggtgccat
ttcaagaaccatgacaagacaatgctgatcggagggcacccgagccatgtgaccgaccga
tgcatccgagtcacgatccatcactgtttcttcgacggcacgaggcagagacatcctcgt
atccggttcgggaaagtccatctctacaacaattatacccaacactgggccatttatgcc
atcggtgcgggagtcgaatctcagatacattctcagtgcaacatatacgaagccggtaaa
aagaaggccgtcttcaagtacatcaccgagaaggcggtagataagaaggaggccgggtcg
ggattcgtaagatcagaaggagatttgtttctgaacggagctcagccgtgcctcgagcac
ggtggcgaggaccgccgcaccttccgtccggaggagcattatgccacgtggaccgtcgct
cctccaacggacagactcaaacacttcctcaagacctcggccggatggcaggacgtacct
cttccgccggagaaataa
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