Candidatus Thioglobus autotrophicus: SP60_04485
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Entry
SP60_04485 CDS
T04079
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
tho
Candidatus Thioglobus autotrophicus
Brite
KEGG Orthology (KO) [BR:
tho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tho03016
]
SP60_04485 (gidA)
03036 Chromosome and associated proteins [BR:
tho03036
]
SP60_04485 (gidA)
Transfer RNA biogenesis [BR:
tho03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SP60_04485 (gidA)
Prokaryotic type
SP60_04485 (gidA)
Chromosome and associated proteins [BR:
tho03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
SP60_04485 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
FAD_binding_2
Pyr_redox_2
AlaDh_PNT_C
HI0933_like
Pyr_redox
FAD_binding_3
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
ALE52536
UniProt:
A0A0M5LEJ8
LinkDB
All DBs
Position
832540..834408
Genome browser
AA seq
622 aa
AA seq
DB search
MSQKPHYSVIVIGGGHAGTEAALASARMGVDTLLVSHNIETLGQMSCNPAIGGIGKGHLV
KEIDAMGGAMASAIDKAGIQFRTLNASKGPAVRATRAQADRVLYKAAIRYTLENQESLSL
FQQAVDDLVIENDVVTGVITQMGLTFTADKVILTSGTFLGGIIHIGQKNFQGGRAGDAPS
NPLSRKLREYDLGVGRLKTGTPPRLDGRTLDYSLMQEQPGDQPLPSFSFMGKPSDHPEQI
SCFITHTNEKAHDFIRAGLKDSPMYTGNIEGIGPRYCPSIEDKVVRFEERNSHQIFVEPE
GLTTNEVYPNGISTSLPYEVQVDFIHSIKGFENAQIVRPGYAIEYDFFDPRGLKQTLEVK
RIANLYFAGQINGTTGYEEAAAQGLLAGVNAACAVQGKDAWLPKRDESYIGVMVDDLITK
GTNEPYRMFTSRAEYRLLLREDNADERLCPIARKLGLISEDRYRAFEQKYAAVDHEKQRL
ESTWIQAGDTQADAVLGQKLNHEYSLLELLKRPKVNYKILSQIDSGQPYLTDDKLIGVVE
NQIKYAGYIKRQLDEIEKYRKNENTRLPADMDYNSIQALSAEVRQKLTQHQPETIGQASR
IQGVTPASISILLVYLKTYKKL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaaaccacactattcagtcattgttattggtggcgggcacgcaggcacggag
gctgcgctcgcctctgcacgcatgggggttgatacactgctggtttctcataatatcgaa
accttggggcaaatgagctgtaaccctgcgattggcgggattggtaaaggacacttggta
aaggagattgacgccatgggcggtgcgatggctagtgctattgacaaagctggcattcag
tttcgcactttaaatgcttcaaaaggtcctgcggttcgagcaacacgagcgcaagctgac
cgagtattgtacaaggcagccattcgctatactttagaaaatcaagaaagcctgtcttta
tttcagcaagcggtcgatgatttggtgattgaaaatgacgtggtaactggtgtcataacg
caaatggggcttacctttacggccgataaagtgattttaacctcgggtacttttttgggc
ggtattattcacattggacagaaaaatttccaaggtgggcgagcgggtgatgcaccttcg
aaccctttgtctagaaaattgcgtgaatatgatttgggcgtgggacgtctaaaaacaggc
accccgccaagattagacggacgcacattggactactctctgatgcaagaacagccaggt
gatcagccactacccagtttttcttttatgggaaagccgtcagatcatccagagcaaatc
tcgtgttttattacccatactaatgaaaaggcacatgactttatccgtgccgggctaaaa
gactcaccaatgtacacgggtaatattgaaggtattggcccaagatattgcccgtctatt
gaggataaagttgtgcgatttgaagaacgaaattcgcatcaaatttttgtagagccagaa
ggcttaaccacgaatgaagtttatccaaatggcatttcaacttccttaccctacgaggtt
caggtagattttatccattcgattaagggattcgagaatgcacagattgtgcgccctggt
tatgccattgaatatgacttctttgatccacgcggtctaaagcaaacactagaagttaag
cgtattgcaaatttgtattttgcaggtcaaattaacggcacgacgggctatgaagaggcg
gcagcgcaagggttattggcaggtgttaatgccgcatgcgccgttcagggtaaggatgct
tggctgccaaagcgtgatgaaagttatattggcgttatggtggatgatttaatcaccaaa
ggcacgaacgaaccgtaccgcatgtttacttcgcgagctgaatatcgattgcttttgcgt
gaggataatgccgatgaacggttgtgccctatcgctcggaagttgggccttattagtgaa
gatagataccgagcgtttgagcaaaaatacgcagccgttgatcatgaaaaacagcgtcta
gaaagcacttggattcaagctggcgacacacaggcggatgcagtattgggtcagaagctt
aaccatgaatattcgttattggagctactaaaacgccctaaggtgaattataaaattctc
agtcaaattgattctggacagccgtacttaactgacgacaaactaattggcgtggtggaa
aatcagattaaatacgcaggctatattaagcgccaattggatgagattgaaaaataccgt
aaaaatgaaaatactcgcctacctgctgacatggattacaattcgattcaggctctgtct
gcagaagtgcgccagaagctgacgcagcaccagccggaaaccattggccaggccagtcga
atccaaggcgttacgcctgcctctatctctattctattggtttatctcaaaacgtataaa
aagctatga
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