Thermotoga sp. RQ7: TRQ7_02685
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Entry
TRQ7_02685 CDS
T03669
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
thr
Thermotoga sp. RQ7
Pathway
thr00040
Pentose and glucuronate interconversions
thr01100
Metabolic pathways
thr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
TRQ7_02685
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TRQ7_02685
Enzymes [BR:
thr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
TRQ7_02685
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AJG40372
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Position
complement(510781..511884)
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AA seq
367 aa
AA seq
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MKVVRTVSLVMFLIIAVALFGSVKASLSDKPVGFASVPTPDLPEGTVGGLGGKVVLVSTP
EDLETYAATEGKYIILVNGTLVFEPKKEINITSDKTIVGLGEAKLIGVGFYIKGQKNIVI
RNLHFEGFYMEDDPRGKKYDFDYICIDNSHHVWIDHCTFVNGNDGAVDIKKFSNYITVSW
NKFVDHDKVSLVGSSDKEDSEQASQAYKVTYHHNYFKNCIQRMPRIRFGMAHVFNNFYSM
GLRTGVSGNVFPIYGVASAMGAKVHVEGNYFMGYGAVMAEAGIAFLPTRIMGPVEGYLTL
GEGDAKNKFYYCKEPETRPVEEGKPAFDPHEYYDYTLDPVDDVPKIVVDGAGAGKLIFEE
LGVARAE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgttcggactgtttcactggtgatgtttcttatcatcgcggtagcgcttttt
ggatccgtaaaggcctctctcagcgacaaaccggtaggatttgcatctgttccgacaccg
gatttgccggagggtacagttggtggattgggtggaaaagtggttcttgtaagcacgcct
gaagatctggaaacttacgcggcaacggaaggaaagtatatcatacttgtgaacggaacg
cttgtttttgaaccaaaaaaagagataaacatcacatctgacaagacgattgtaggactt
ggcgaagcaaaacttattggagtgggattctacataaaagggcagaaaaacattgtaatt
agaaatctgcactttgaaggattctacatggaagacgatccacgaggcaagaagtatgac
ttcgattacatctgtattgacaactctcaccacgtctggatcgatcactgtactttcgtg
aatggaaacgatggagccgtagatatcaagaagttttcgaactacataacagtttcctgg
aacaaattcgtggatcacgacaaggtatcgctcgttggctcttctgacaaagaagattcg
gaacaggccagccaggcctacaaagtcacctatcaccacaactacttcaaaaactgcatt
cagagaatgccaagaatcagatttggaatggcgcatgtgttcaacaacttctacagcatg
ggattgagaacgggtgtttccggaaatgtctttcccatttatggcgtggcttcagcgatg
ggagcaaaagttcacgttgagggaaactacttcatgggatacggtgctgtcatggcagaa
gccggcattgcgttccttcccaccagaatcatggggcctgtggaaggttatctgacactg
ggtgagggcgatgcgaagaacaagttctactactgcaaggaacctgaaacccgtcctgtt
gaggaaggaaagcctgcttttgatcctcacgaatactacgactacacactcgatcccgtc
gatgatgttccaaagatagtagtggatggtgcaggagcaggcaaactgatatttgaggaa
ttgggtgtggcgcgagcagagtaa
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